!!SEQUENCE_LIST 1.0
(Peptide) TFASTA of: Upka_Bovin.Swissprot from: 1 to: 258 February 14, 1997 14:49
ID UPKA_BOVIN STANDARD; PRT; 258 AA.
AC P38572;
DT 01-OCT-1994 (REL. 30, CREATED)
DT 01-OCT-1994 (REL. 30, LAST SEQUENCE UPDATE)
DT 01-FEB-1995 (REL. 31, LAST ANNOTATION UPDATE)
DE UROPLAKIN IA (UPIA). . . .
TO: gb_tags:* Sequences: 817,595 Symbols: 313,362,575 Word Size: 1
Databases searched:
GB_EST1, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST2, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST3, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST4, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST5, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST6, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST7, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST8, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST9, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_STS, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_GSS, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_EST10, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
GB_HTG, Release 98.0, Released on 0Dec96, Formatted on 0Dec96
Searching all six frames.
Scoring matrix: GenRunData:Blosum50.Cmp
Variable pamfactor used
Gap creation penalty: 16 Gap extension penalty: 4
Histogram Key:
Each histogram symbol represents 7541 search set sequences
Each inset symbol represents 78 search set sequences
z-scores computed from opt scores
z-score obs exp
(=) (*)
< 20 8321 0 :*=
22 155 0 :*
24 421 5 :*
26 1331 103 :*
28 4789 1111 :*
30 15233 6746 :*==
32 40376 26086 :===*==
34 83959 70742 :=========*==
36 150335 145286 :===================*
38 230081 240104 :===============================*
40 311312 334925 :========================================== *
42 378006 409404 :=================================================== *
44 427722 451611 :========================================================= *
46 452418 459977 :===========================================================*
48 436466 440375 :==========================================================*
50 413781 401844 :=====================================================*=
52 365640 353288 :==============================================*==
54 309480 301770 :========================================*=
56 263875 252070 :=================================*=
58 215501 206945 :===========================*=
60 170984 167638 :======================*
62 136800 134396 :=================*=
64 107064 106884 :==============*
66 83605 84478 :===========*
68 60633 66449 :========*
70 47109 52073 :======*
72 37866 40690 :=====*
74 31235 31725 :====*
76 25314 24692 :===*
78 20184 19193 :==*
80 16138 14903 :=*=
82 12850 11401 :=*
84 10187 9031 :=*
86 7901 6988 :*=
88 6271 5407 :*
90 5014 4183 :*
92 3893 3237 :* :=======================================*
94 3017 2505 :* :================================*======
96 2360 1938 :* :========================*======
98 1784 1500 :* :===================*===
100 1353 1160 :* :==============*===
102 1052 898 :* :===========*==
104 816 695 :* :========*==
106 633 537 :* :======*==
108 499 416 :* :=====*=
110 378 322 :* :====*
112 299 249 :* :===*
114 231 193 :* :==*
116 175 149 :* :=*=
118 157 115 :* :=*=
>120 566 90 :* :=*======
Results sorted and z-values calculated from opt score
1747 scores saved that exceeded 110
261407 optimizations performed
Joining threshold: 42, optimization threshold: 45, opt. width: 32
The best scores are: frame init1 initn opt z-sc E(4896824)..
Gb_Est2:Aa105174 Begin: 49 End: 534
! AA105174 mp43d10.r1 Barstead MPLRB1...(1) 150 187 176 287.7 1.6e-07
Gb_Est1:Aa014301 Begin: 42 End: 512
! AA014301 mi66c05.r1 Soares mouse em...(3) 150 150 156 253.5 1.3e-05
Gb_Est2:Aa138105 Begin: 264 End: 539
! AA138105 mq30a03.r1 Barstead MPLRB1...(3) 95 155 155 252.6 1.4e-05
Gb_Est10:W98963 Begin: 109 End: 483
! W98963 mf92a06.r1 Soares mouse embr...(1) 150 150 152 247.5 2.8e-05
Gb_Est9:W48149 Begin: 84 End: 449
! W48149 mc86c11.r1 Soares mouse embr...(3) 150 150 152 246.2 3.2e-05
Gb_Est2:Aa087170 Begin: 203 End: 529
! AA087170 mn95a06.r1 Stratagene mous...(2) 98 98 148 239.8 7.4e-05
Gb_Est9:W20815 Begin: 6 End: 374
! W20815 mb93e05.r1 Soares mouse p3NM...(3) 80 123 142 231.9 0.0002
Gb_Est2:Aa109912 Begin: 134 End: 454
! AA109912 mp10d12.r1 Life Tech mouse...(2) 107 144 139 225.8 0.00045
Gb_Est5:N23779 Begin: 52 End: 420
! N23779 yx35d11.r1 Homo sapiens cDNA...(1) 107 143 138 223.9 0.00057
Gb_Est10:W89589 Begin: 109 End: 480
! W89589 mf72f03.r1 Soares mouse embr...(1) 133 133 135 213.7 0.0021
Gb_Est1:Aa072834 Begin: 5 End: 292
! AA072834 mm72b05.r1 Stratagene mous...(2) 84 142 123 200.9 0.011
Gb_Est6:R24292 Begin: 64 End: 387
! R24292 yg32a06.r1 Homo sapiens cDNA...(1) 110 110 123 199.6 0.013
Gb_Est2:Aa109122 Begin: 282 End: 596
! AA109122 mm04d02.r1 Stratagene mous...(3) 85 128 124 198.3 0.015
Gb_Est3:H16331 Begin: 45 End: 326
! H16331 ym23b06.r1 Homo sapiens cDNA...(3) 88 124 119 189.5 0.047
Gb_Est2:Aa140447 Begin: 255 End: 521
! AA140447 mq84g02.r1 Stratagene mous...(3) 82 124 118 187.8 0.058
Gb_Est1:Aa054904 Begin: 138 End: 461
! AA054904 SWAMCA1492SK Brugia malayi...(3) 61 61 112 179.1 0.18
Gb_Est6:R13910 Begin: 94 End: 333
! R13910 yf62d04.r1 Homo sapiens cDNA...(1) 110 110 110 176.9 0.23
Gb_Est9:W50192 Begin: 21 End: 365
! W50192 mb08d07.r1 Life Tech mouse b...(3) 76 117 108 174.2 0.33
Gb_Est1:Aa032880 Begin: 176 End: 652
! AA032880 mi37b02.r1 Soares mouse em...(2) 76 104 110 173.5 0.36
Gb_Est7:R51442 Begin: 4 End: 264
! R51442 yg72h02.r1 Homo sapiens cDNA...(1) 78 112 107 171.4 0.48
Gb_Est2:Aa116505 Begin: 261 End: 536
! AA116505 mp94a12.r1 Soares 2NbMT Mu...(3) 72 112 107 169.9 0.58
Gb_Est3:Celk102h4f Begin: 47 End: 346
! D70406 C.elegans cDNA clone yk102h4...(2) 78 118 103 167.3 0.81
Gb_Est1:Aa073127 Begin: 73 End: 378
! AA073127 mm94e11.r1 Stratagene mous...(1) 96 96 103 166.5 0.89
Gb_Est2:Aa142522 Begin: 190 End: 360
! AA142522 mq57e11.r1 Soares 2NbMT Mu...(1) 89 89 104 166.0 0.95
Gb_Est3:H32925 Begin: 19 End: 201
! H32925 EST108471 Rattus sp. cDNA 5'...(1) 96 96 100 165.7 0.99
Gb_Est6:R35615 Begin: 76 End: 303
! R35615 yg66f01.r1 Homo sapiens cDNA...(1) 103 103 103 165.4 1
Gb_Est2:Aa133983 Begin: 64 End: 351
! AA133983 zn88c11.r1 Stratagene lung...(1) 63 94 104 164.2 1.2
Gb_Est8:T79690 Begin: 18 End: 212
! T79690 yd71d05.r1 Homo sapiens cDNA...(3) 65 65 99 163.2 1.4
Gb_Est6:N89259 Begin: 56 End: 232
! N89259 K8678F Fetal heart, Lambda Z...(2) 98 98 98 162.9 1.4
Gb_Est1:Aa034695 Begin: 63 End: 320
! AA034695 mi41g01.r1 Soares mouse em...(3) 63 102 103 162.3 1.5
Gb_Est10:W96413 Begin: 23 End: 334
! W96413 ze10g12.r1 Soares fetal hear...(2) 72 101 101 161.3 1.7
Gb_Est9:W78208 Begin: 64 End: 249
! W78208 zd68e02.r1 Soares fetal hear...(1) 96 96 100 160.4 1.9
Gb_Est9:W53701 Begin: 186 End: 605
! W53701 md15a08.r1 Soares mouse embr...(3) 79 107 102 159.7 2.1
Gb_Est9:W27019 Begin: 225 End: 524
! W27019 19c2 Human retina cDNA rando...(3) 82 106 101 159.7 2.1
Gb_Est9:W80241 Begin: 7 End: 276
! W80241 me91g05.r1 Soares mouse embr...(1) 91 91 100 158.9 2.4
Gb_Est9:W11956 Begin: 125 End: 475
! W11956 ma79f09.r1 Soares mouse p3NM...(2) 90 114 100 156.6 3.2
Gb_Est9:W14643 Begin: 133 End: 390
! W14643 mb30d06.r1 Soares mouse p3NM...(1) 59 97 98 156.5 3.2
Gb_Est1:Aa035756 Begin: 59 End: 238
! AA035756 zk28e05.r1 Soares pregnant...(2) 96 96 96 155.6 3.6
Gb_Est2:Aa134728 Begin: 33 End: 302
! AA134728 zm79e04.r1 Stratagene neur...(3) 88 88 97 155.6 3.6
Gb_Est3:C05069 Begin: 8 End: 277
! C05069 Human Heart cDNA, clone 3NHC...(2) 96 96 97 154.8 4
Gb_Est9:W20733 Begin: 100 End: 357
! W20733 mb96g04.r1 Soares mouse p3NM...(1) 73 103 96 154.6 4.1
Gb_Est9:W75963 Begin: 60 End: 224
! W75963 zd59d08.r1 Soares fetal hear...(3) 96 96 96 152.8 5.1
Gb_Est3:H04602 Begin: 52 End: 150 Strand: -
! H04602 yj49f03.s1 Homo sapiens cDNA...(4) 89 89 89 151.8 5.9
Gb_Est2:Aa106685 Begin: 47 End: 352
! AA106685 ml83h08.r1 Stratagene mous...(2) 77 77 94 150.4 7
Gb_Est9:W58053 Begin: 419 End: 499 Strand: -
! W58053 zd22d12.r1 Soares fetal hear...(5) 96 118 96 150.2 7.2
Gb_Est3:H33147 Begin: 24 End: 302
! H33147 EST108860 Rattus sp. cDNA 5'...(3) 85 85 92 150.0 7.4
Gb_Est1:Aa046578 Begin: 211 End: 375 Strand: -
! AA046578 zk62c08.r1 Soares pregnant...(6) 85 85 94 149.5 7.9
Gb_Est9:W55990 Begin: 44 End: 178
! W55990 zd15b06.r1 Soares fetal hear...(2) 85 85 93 149.4 8
Gb_Est9:W40803 Begin: 2 End: 193
! W40803 mc67g04.r1 Soares mouse embr...(2) 62 101 94 149.4 8
Gb_Est8:T47440 Begin: 97 End: 195
! T47440 yb13h05.r1 Homo sapiens cDNA...(1) 88 88 92 148.0 9.6
\\End of List
Upka_Bovin.Swissprot
Gb_Est2:Aa105174
LOCUS AA105174 591 bp mRNA EST 30-OCT-1996
DEFINITION mp43d10.r1 Barstead MPLRB1 Mus musculus cDNA clone 571987 5'
similar to gb:L08115 Mus musculus antigen (MOUSE);.
ACCESSION AA105174
NID g1654926
KEYWORDS EST. . . .
SCORES (1) Init1: 150 Initn: 187 Opt: 176 z-score: 287.7 E(): 1.6e-07
23.0% identity in 165 aa overlap
10 20 30 40
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMG-NIIILLSGLALFAETVWVTAD
|: | : ||: : |::| |:|: |:|:|::| :|: |
Aa105174 IHASPFCPSRSCLLSHATPACTMPVKGGSKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFD
10 20 30 40 50 60
50 60 70 80 90 100
Upka_Bovin.S QYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIY
: : ::::: ::|::| | | :::|: :| :|: : : |: :: ::|:|:
Aa105174 SQTKSIFEQENNHSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIF
70 80 90 100 110 120
110 120 130 140 150 160
Upka_Bovin.S IFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSG
:| |: : :|||:| :::: : : |: |: :: : :: | : :||| :|
Aa105174 AIEIAAAVWGYTHKDEVIKELQEFYKDT---YQKLRSKDEPQAETLKAIHMALDCCGIAG
130 140 150 160 170
170 180 190 200 210 220
Upka_Bovin.S PMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGH
|
Aa105174 PWSSLSRHCPRTALESFRLA
180 190
Upka_Bovin.Swissprot
Gb_Est1:Aa014301
LOCUS AA014301 584 bp mRNA EST 31-JUL-1996
DEFINITION mi66c05.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 468488 5' similar to gb:L08115 Mus musculus antigen (MOUSE);.
ACCESSION AA014301
NID g1475181
KEYWORDS EST. . . .
SCORES (3) Init1: 150 Initn: 150 Opt: 156 z-score: 253.5 E(): 1.3e-05
22.5% identity in 160 aa overlap
10 20 30 40
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMG-NIIILLSGLALFAETVWVTADQYR
|: | : ||: : |::| |:|: |:|:|::| :|: |:
Aa014301 SPFCPSRSCLLSHATPACTMPVKGGSKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQT
10 20 30 40 50 60
50 60 70 80 90 100
Upka_Bovin.S IYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFE
: ::::: ::|::| | | :::|: :| :|: : : |: :: ::|:|: :|
Aa014301 KSIFEQENNHSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIE
70 80 90 100 110 120
110 120 130 140 150 160
Upka_Bovin.S CASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMD
|: : :|||:| :::: : : |: : :: || : | : :||
Aa014301 IAAAVWGYTHKDEVIKELQEFYKDTYQKLRSKDEPQRETLK---AIHMALDCCCILVFGA
130 140 150 160 170
170 180 190 200 210 220
Upka_Bovin.S WVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAID
Aa014301 VYLDTCPKNSFGNFRLA
180 190
Upka_Bovin.Swissprot
Gb_Est2:Aa138105
LOCUS AA138105 539 bp mRNA EST 02-DEC-1996
DEFINITION mq30a03.r1 Barstead MPLRB1 Mus musculus cDNA clone 580204 5'
similar to TR:E236368 E236368 CELL SURFACE GLYCOPROTEIN CD53. ;.
ACCESSION AA138105
NID g1700049
KEYWORDS EST. . . .
SCORES (3) Init1: 95 Initn: 155 Opt: 155 z-score: 252.6 E(): 1.4e-05
27.7% identity in 94 aa overlap
60 70 80 90 100 110
Upka_Bovin.S LMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFECAS
| :|| : : ::||:::|:|:::::| :
Aa138105 LCHLIILISILVGCQPAHRHRDLRHGHRFVGCIGALKENKCLLLTFFVLLLLVFLLEATI
60 70 80 90 100 110
120 130 140 150 160 170
Upka_Bovin.S CITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVN
: ::: | : | : |: | :|::::| | || |: |: : :|||:|: || :
Aa138105 AVLFFAYSDKIDSYAQQDLKKGLHLYGTQGNVG--LTNAWSIIQTDFRCCGVSNYTDWFE
120 130 140 150 160 170
180 190 200 210 220 230
Upka_Bovin.S FTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYT
:|
Aa138105 VYNA
Upka_Bovin.Swissprot
Gb_Est10:W98963
LOCUS W98963 537 bp mRNA EST 16-JUL-1996
DEFINITION mf92a06.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 421714 5' similar to gb:M38690 CD9 ANTIGEN (HUMAN); gb:L08115
Mus musculus antigen (MOUSE);.
ACCESSION W98963
NID g1428929 . . .
SCORES (1) Init1: 150 Initn: 150 Opt: 152 z-score: 247.5 E(): 2.8e-05
24.0% identity in 125 aa overlap
10 20 30
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMG-NIIILLS
|: | : ||: : |::| |:|: |:
W98963 SGASGQPLAAACLSRLSSPFCPSRSCLLSHATPACTMPVKGGSKCIKYLLFGFNFIFWLA
10 20 30 40 50 60
40 50 60 70 80 90
Upka_Bovin.S GLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRR
|:|::| :|: |: : ::::: ::|::| | | :::|: :| :|: : :
W98963 GIAVLAIGLWLRFDSQTKSIFEQENNHSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQ
70 80 90 100 110 120
100 110 120 130 140 150
Upka_Bovin.S SMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLW
|: :: ::|:|: :| |: : ::| :| :::||
W98963 CMLGLFFGFLLVIFAIEIAAAVWGHTDKDKVIKNPEVSRDTTKVSEEGXPSGK
130 140 150 160 170
160 170 180 190 200 210
Upka_Bovin.S DRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHL
Upka_Bovin.Swissprot
Gb_Est9:W48149
LOCUS W48149 615 bp mRNA EST 24-MAY-1996
DEFINITION mc86c11.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 355412 5' similar to gb:M38690 CD9 ANTIGEN (HUMAN); gb:L08115
Mus musculus antigen (MOUSE);.
ACCESSION W48149
NID g1333217 . . .
SCORES (3) Init1: 150 Initn: 150 Opt: 152 z-score: 246.2 E(): 3.2e-05
24.6% identity in 122 aa overlap
10 20 30
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMG-NIIILLSGLA
|: | : ||: : |::| |:|: |:|:|
W48149 LRQPLAAACLSRLSSPFCPSRSCLLSHATPACTMPVKGGSKCIKYLLFGFNFIFWLAGIA
10 20 30 40 50 60
40 50 60 70 80 90
Upka_Bovin.S LFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMI
::| :|: |: : ::::: ::|::| | | :::|: :| :|: : : |:
W48149 VLAIGLWLRFDSQTKSIFEQENNHSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCML
70 80 90 100 110 120
100 110 120 130 140 150
Upka_Bovin.S LTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRI
:: ::|:|: :| |: : :|||:| :::
W48149 GLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQKLRSKDEPSGNTQSHHMAL
130 140 150 160 170 180
Upka_Bovin.Swissprot
Gb_Est2:Aa087170
LOCUS AA087170 583 bp mRNA EST 23-OCT-1996
DEFINITION mn95a06.r1 Stratagene mouse lung 937302 Mus musculus cDNA clone
551794 5' similar to gb:D16432 Mouse murine CD63 mRNA for murine
homologue of CD63/ME491, complete (MOUSE);.
ACCESSION AA087170
NID g1630440 . . .
SCORES (2) Init1: 98 Initn: 98 Opt: 148 z-score: 239.8 E(): 7.4e-05
25.7% identity in 113 aa overlap
40 50 60 70 80 90
Upka_Bovin.S AETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILT
: | | :|:|| | :| : :::|
Aa087170 VGLIAIGVAVQVVLKQAITHETTAGSLLPVVIIAVGAFLFLVAFVGCCGACKENYCLMIT
40 50 60 70 80 90
100 110 120 130 140 150
Upka_Bovin.S YLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMI
: |:: :|:: | | :::|: || : |: : :|:: | |: : : : |:::
Aa087170 FAIFLSLIMLVEVAVAVAGYVFRDQVKSEFNKSFQQQMQNYLKDN----KTATILDKLQK
100 110 120 130 140 150
160 170 180 190 200 210
Upka_Bovin.S EQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFT
|::|||:|: || |::: | :
Aa087170 ENNCCGASNYTDWENIAAMQRQSPDSCCITXLWLWNDSKIH
160 170 180 190
Upka_Bovin.Swissprot
Gb_Est9:W20815
LOCUS W20815 460 bp mRNA EST 10-SEP-1996
DEFINITION mb93e05.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone 336992 5'
similar to PIR:JC2297 JC2297 CD63 antigen - rabbit ;.
ACCESSION W20815
NID g1297831
KEYWORDS EST. . . .
SCORES (3) Init1: 80 Initn: 123 Opt: 142 z-score: 231.9 E(): 0.0002
22.5% identity in 129 aa overlap
40 50 60 70 80 90
Upka_Bovin.S AETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILT
: | | :|::: :| |:: : | : |
W20815 VVIIAVGALLFIIGLIGCCATIRESRCGLAT
10 20 30
100 110 120 130 140 150
Upka_Bovin.S YLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMI
:::::|:::: | : : :|::| : :: : ::: |:: :::: :| | ::
W20815 FVFILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNSDA--ASRAIDYVQR
40 50 60 70 80
160 170 180 190 200 210
Upka_Bovin.S EQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFT
: :||| : || | |: |: | : | | |||:|:
W20815 QLHCCGIHNYSDWEN-TDWFKETKNQSV---PLSCCRETAKSCNGSLANPSDLYAEGCEA
90 100 110 120 130 140
220 230 240 250
Upka_Bovin.S KGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL
W20815 LVVKKLQ
150
Upka_Bovin.Swissprot
Gb_Est2:Aa109912
LOCUS AA109912 505 bp mRNA EST 06-NOV-1996
DEFINITION mp10d12.r1 Life Tech mouse embryo 8 5dpc 10664019 Mus musculus cDNA
5' similar to SW:PET3_HUMAN P48509 PLATELET-ENDOTHELIAL TETRASPAN
ANTIGEN 3 ;.
ACCESSION AA109912
NID g1661782 . . .
SCORES (2) Init1: 107 Initn: 144 Opt: 139 z-score: 225.8 E(): 0.00045
28.2% identity in 110 aa overlap
10 20 30 40
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALFAETVWV
|: : || | : |:|||::| :|:
Aa109912 PLGWPELSAISGNGYEWPRMGEFNEKKATCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWT
20 30 40 50 60 70
50 60 70 80 90 100
Upka_Bovin.S TADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILML
| : |:: | :| |:| : | :|:: :| |:: :||::: |:||:|
Aa109912 LALKSDYISLLASS---TYLATAYILVVAGVVVMVTGVLGCCATFKERRNLLRLYFILLL
80 90 100 110 120 130
110 120 130 140 150 160
Upka_Bovin.S IIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCG
||:::| : | :|:: : :
Aa109912 IIFLLEIIAGILAYVYYQQLNTELRENLKGHMIKRYH
140 150 160
Upka_Bovin.Swissprot
Gb_Est5:N23779
LOCUS N23779 515 bp mRNA EST 28-DEC-1995
DEFINITION yx35d11.r1 Homo sapiens cDNA clone 263733 5' similar to
SP:CD9_CERAE P30409 CD9 ANTIGEN ;.
ACCESSION N23779
NID g1137929
KEYWORDS EST. . . .
SCORES (1) Init1: 107 Initn: 143 Opt: 138 z-score: 223.9 E(): 0.00057
27.8% identity in 126 aa overlap
10 20 30 40 50
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALFAETVWVTADQYRIYPL
| |: : || | : |:|||::| :|: | : |
N23779 GLGRVVAPGRXKFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISL
10 20 30 40 50 60
60 70 80 90 100 110
Upka_Bovin.S MGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFECASC
: :|| :| |:| : | :|:: :| |:: :||::: |:||:|||:::| :
N23779 L-ASG--TYLATAYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAG
70 80 90 100 110
120 130 140 150 160 170
Upka_Bovin.S ITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNF
| :|:: : : :: : |: :|
N23779 ILAYAYYQQLNTELKENLKDTMTKRYHQPGHEAVNQRCGPADSRKFQLLXQQTN
120 130 140 150 160 170
Upka_Bovin.Swissprot
Gb_Est10:W89589
LOCUS W89589 864 bp mRNA EST 12-SEP-1996
DEFINITION mf72f03.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 419837 5' similar to gb:M38690 CD9 ANTIGEN (HUMAN); gb:L08115
Mus musculus antigen (MOUSE);.
ACCESSION W89589
NID g1404913 . . .
SCORES (1) Init1: 133 Initn: 133 Opt: 135 z-score: 213.7 E(): 0.0021
24.2% identity in 124 aa overlap
10 20 30
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMG-NIIILLS
|: | : ||: : |::| |:|: |:
W89589 SGASGQPLAAACLSRLSSPFCPSRSCLLSHATPACTMPVKGGSKCIKYLLFGFNFIFWLA
10 20 30 40 50 60
40 50 60 70 80 90
Upka_Bovin.S GLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRR
|:|::| :|: |: : ::::: ::|::| | | :::|: :| :|: : :
W89589 GIAVLAIGLWLRFDSQTKSIFEQENNHSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQ
70 80 90 100 110 120
100 110 120 130 140 150
Upka_Bovin.S SMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLW
|: :: ::|:|: :| |: : :|| | ::|
W89589 CMLGLFFGFLLVIFAIEIAAAVWGYTTRMRXLKNQEFSRTPTKVTDKDEPSGNTHSHHMA
130 140 150 160 170 180
160 170 180 190 200 210
Upka_Bovin.S DRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHL
W89589 WTAVAYWSFEQFTRTLPKNSFXKFRLACLKHQXVXKSQLWRWYARWYVFMFXNCVHEAES
190 200 210 220 230 240
Upka_Bovin.Swissprot
Gb_Est1:Aa072834
LOCUS AA072834 386 bp mRNA EST 04-OCT-1996
DEFINITION mm72b05.r1 Stratagene mouse macrophage (#937306) Mus musculus cDNA
clone 533937 5'.
ACCESSION AA072834
NID g1594565
KEYWORDS EST. . . .
SCORES (2) Init1: 84 Initn: 142 Opt: 123 z-score: 200.9 E(): 0.011
29.5% identity in 105 aa overlap
130 140 150 160 170 180
Upka_Bovin.S NPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVV
| | :||| :: |: :| | : : |
Aa072834 TMEELHCCGFNNYTDF----NASRFVKENKV
10 20
190 200 210 220 230 240
Upka_Bovin.S FPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMW
|| || || || : | | : : ::|||::| | | : : :: : ::
Aa072834 FP-PP-CCANPGNH---TVEPCTEEKAKSMKVQGCFKEILHRIRANAVTVGGVAVGVAAL
30 40 50 60 70 80
250
Upka_Bovin.S TLPVMLIAMYFYTTL
| :|:::||:| :|
Aa072834 ELAAMVVSMYLYCNLKXDYYFLLTCCRHMETRKRHLAQLSSSNGWR
90 100 110 120
Upka_Bovin.Swissprot
Gb_Est6:R24292
LOCUS R24292 441 bp mRNA EST 20-APR-1995
DEFINITION yg32a06.r1 Homo sapiens cDNA clone 33871 5' similar to SP:S39262
S39262 PLATELET CELL SURFACE GLYCOPROTEIN - ;.
ACCESSION R24292
NID g779180
KEYWORDS EST. . . .
SCORES (1) Init1: 110 Initn: 110 Opt: 123 z-score: 199.6 E(): 0.013
23.9% identity in 109 aa overlap
30 40 50 60 70 80
Upka_Bovin.S IIILLSGLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGA
:| :| |:| : | :|:: :| |
R24292 LAGCHGSGHLDAGPQEXLHQPAGLRTYLATAYILVVAGTVVMVTGVLGCCA
10 20 30 40 50
90 100 110 120 130 140
Upka_Bovin.S ALCRRRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGR
:: :||::: |:||:|||:::| : | :|:: : : :: : |: :| : :: :
R24292 TFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNTELKENLKDTMTKRYHQPGH-E
60 70 80 90 100 110
150 160 170 180 190 200
Upka_Bovin.S ELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEG
:| |::: | :||::::
R24292 AVTSAVDQLQQEFHCCSSNNFTGLGETVSGSDHRRAG
120 130 140
Upka_Bovin.Swissprot
Gb_Est2:Aa109122
LOCUS AA109122 604 bp mRNA EST 04-NOV-1996
DEFINITION mm04d02.r1 Stratagene mouse kidney (#937315) Mus musculus cDNA
clone 520515 5' similar to SW:CD63_MOUSE P41731 CD63 ANTIGEN. ;.
ACCESSION AA109122
NID g1660575
KEYWORDS EST. . . .
SCORES (3) Init1: 85 Initn: 128 Opt: 124 z-score: 198.3 E(): 0.015
19.6% identity in 107 aa overlap
40 50 60 70 80 90
Upka_Bovin.S LFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMI
| : | | :|::: :| |:: : | :
Aa109122 AGILCYVGAYVFITYDDYDHFFEDVYTLFPAVVIIAVGALLFIIGLIGCCATIRESRCGL
70 80 90 100 110 120
100 110 120 130 140 150
Upka_Bovin.S LTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRI
|:::::|:::: | : : :|::| : :: : ::: |:: :::: :| | :
Aa109122 ATFVFILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNSDA--ASRAIDYV
130 140 150 160 170 180
160 170 180 190 200 210
Upka_Bovin.S MIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYL
: : :||| : || |
Aa109122 QRQLHCCGIHNYSDWENTD
190 200
Upka_Bovin.Swissprot
Gb_Est3:H16331
LOCUS H16331 618 bp mRNA EST 27-JUN-1995
DEFINITION ym23b06.r1 Homo sapiens cDNA clone 48858 5' similar to SP:CD9_BOVIN
P30932 CD9 ;.
ACCESSION H16331
NID g881151
KEYWORDS EST. . . .
SCORES (3) Init1: 88 Initn: 124 Opt: 119 z-score: 189.5 E(): 0.047
30.9% identity in 97 aa overlap
10 20 30 40 50
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALFAETVWVTADQYRIYPLMGV
| |: : || | : |:|||::| :|: | : |: :
H16331 TXVSPRMVQFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLL-A
10 20 30 40 50
60 70 80 90 100 110
Upka_Bovin.S SGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFECASCITS
|| :| |:| : | :|:: :| |:: :||::: |:||:|||::
H16331 SG--TYLATAYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLAGDHRWYPR
60 70 80 90 100 110
120 130 140 150 160 170
Upka_Bovin.S YTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSA
H16331 LRLITSSXTRRSRRTXKDTMDQALTPAGPXGCXPAFWDQLQQDFHCFGKQQFTGFGETLS
120 130 140 150 160 170
Upka_Bovin.Swissprot
Gb_Est2:Aa140447
LOCUS AA140447 619 bp mRNA EST 02-DEC-1996
DEFINITION mq84g02.r1 Stratagene mouse melanoma (#937312) Mus musculus cDNA
clone 585458 5' similar to gb:L08115 Mus musculus antigen (MOUSE);.
ACCESSION AA140447
NID g1702668
KEYWORDS EST. . . .
SCORES (3) Init1: 82 Initn: 124 Opt: 118 z-score: 187.8 E(): 0.058
22.8% identity in 92 aa overlap
50 60 70 80 90 100
Upka_Bovin.S YRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYI
:|: :| :|: : : |: :: ::|:|:
Aa140447 SDQEHLRAREXPFQFLHRSVHSDWSRGLMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFA
60 70 80 90 100 110
110 120 130 140 150 160
Upka_Bovin.S FECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGP
:| |: : :|||:| :::: : : |: : :: || : | : :||| :||
Aa140447 IEIAAAVWGYTHKDEVIKELQEFYKDTYQKLRSKDEPQRETLK---AIHMALDCCGIAGP
120 130 140 150 160 170
170 180 190 200 210 220
Upka_Bovin.S MDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHA
::
Aa140447 LEQFISDTCPKKQLLESFQVKPCLKASVRSSQQV
180 190 200
Upka_Bovin.Swissprot
Gb_Est1:Aa054904
LOCUS AA054904 525 bp mRNA EST 12-DEC-1996
DEFINITION SWAMCA1492SK Brugia malayi adult male cDNA (SAW94NL-BmAM) Brugia
malayi cDNA clone SWAMCA1492 5'.
ACCESSION AA054904
NID g1547238
KEYWORDS EST. . . .
SCORES (3) Init1: 61 Initn: 61 Opt: 112 z-score: 179.1 E(): 0.18
24.1% identity in 108 aa overlap
10 20 30 40 49
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALFAETVWVTADQYRIY
|:: :::: |:||||: ::|: | | |
Aa054904 LLFSFYKDGSGXMNICMMSENTNGQCAQICLLFYTVFFWLTGLALIFLSLWTLLDPRRNY
20 30 40 50 60 70
50 60 70 80 90 100
Upka_Bovin.S --PLMGVSGKDDVFAGA-WIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIF
|: | | :: || :|:: | ::|: :| ::: : :::|::| :||:::
Aa054904 LLDLVDFSEDDPLLRGACHLALITGSVVMIVGFIGCCGTIKKSLCLLITFVICLLILFFA
80 90 100 110 120 130
110 120 130 140 150 160
Upka_Bovin.S ECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPM
: : : :|: :|:|
Aa054904 DITIACLALFYRNKFVGNRLSVYLTNLTHDRYYRLYWVT
140 150 160 170
Upka_Bovin.Swissprot
Gb_Est6:R13910
LOCUS R13910 456 bp mRNA EST 12-APR-1995
DEFINITION yf62d04.r1 Homo sapiens cDNA clone 26909 5' similar to SP:S39262
S39262 PLATELET CELL SURFACE GLYCOPROTEIN - ;.
ACCESSION R13910
NID g766986
KEYWORDS EST. . . .
SCORES (1) Init1: 110 Initn: 110 Opt: 110 z-score: 176.9 E(): 0.23
26.3% identity in 80 aa overlap
30 40 50 60 70 80
Upka_Bovin.S IIILLSGLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGA
:| :| |:| : | :|:: :| |
R13910 YLQLLLLAGWPGCHGSGHLDAGPQEXLHQPAGLRTYLATAYILVVAGTVVMVTGVLGCCA
10 20 30 40 50 60
90 100 110 120 130 140
Upka_Bovin.S ALCRRRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGR
:: :||::: |:||:|||:::| : | :|:: : : :: : |: :|
R13910 TFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNTELKENLKDTMTKRYHQPGHEA
70 80 90 100 110 120
150 160 170 180 190 200
Upka_Bovin.S ELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEG
R13910 VDQRCRTSCSRSFHCCWQQQLTGLGETVSWI
130 140 150
Upka_Bovin.Swissprot
Gb_Est9:W50192
LOCUS W50192 428 bp mRNA EST 29-MAY-1996
DEFINITION mb08d07.r1 Life Tech mouse brain Mus musculus cDNA clone 319597 5'
similar to SW:CD53_HUMAN P19397 LEUKOCYTE SURFACE ANTIGEN CD53. [1]
;.
ACCESSION W50192
NID g1338610 . . .
SCORES (3) Init1: 76 Initn: 117 Opt: 108 z-score: 174.2 E(): 0.33
20.2% identity in 119 aa overlap
20 30 40 50 60 70 79
Upka_Bovin.S LVMGNIIILLSGLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVAS
|: | : | :|: : | :|:::
W50192 MKKVSCPISRPSPTSGGFDPVWLFLVVGGVMFILGF
10 20 30
80 90 100 110 120 130 139
Upka_Bovin.S FGVGAALCRRRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSAD
| :|| : :: : ::: ||:::| :: : ::: :|:: :: :: :: : | |
W50192 AGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDD
40 50 60 70 80 90
140 150 160 170 180 190 199
Upka_Bovin.S SNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIP
:| | | : :|||: | ||
W50192 I----DLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDSNASRERCGVP
100 110 120 130 140
Upka_Bovin.Swissprot
Gb_Est1:Aa032880
LOCUS AA032880 655 bp mRNA EST 22-AUG-1996
DEFINITION mi37b02.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 465675 5' similar to gb:M33680 CD81 ANTIGEN (HUMAN);.
ACCESSION AA032880
NID g1504273
KEYWORDS EST. . . .
SCORES (2) Init1: 76 Initn: 104 Opt: 110 z-score: 173.5 E(): 0.36
20.4% identity in 162 aa overlap
10 20 30
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALF
| :| : : || : |::: |:| :::
Aa032880 APGYLPVPDPGTASPYRPLQDQSKLRRPRTAMGVEGCTKCIKYLLFVFNFVFWLAGGVIL
30 40 50 60 70 80
40 50 60 70 80 90
Upka_Bovin.S AETVWVTADQYR---IYPLMGVSGKDDVF-AGAWIAIFCGFSFFVVASFGVGAALCRRRS
: ::|: | :| :| : ::| :| :| | | :: |: :| :|: : :
Aa032880 GVALWLRHDPQTTSLLYLELGNKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQC
90 100 110 120 130 140
100 110 120 130 140 149
Upka_Bovin.S MILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQML--TFYSADSNQGRELTRL
:: |:: ::|:: | |: | :::::| :::: : : | | : :: |:|::: ::|
Aa032880 LLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKRFYDQALQQAVMDDDANNSKAVVRH
150 160 170 180 190 200
150 160 170 180 190 200 209
Upka_Bovin.S WDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGH
: : : :|||
Aa032880 FTETL---NCCGL
210
Upka_Bovin.Swissprot
Gb_Est7:R51442
LOCUS R51442 479 bp mRNA EST 18-MAY-1995
DEFINITION yg72h02.r1 Homo sapiens cDNA clone 38894 5' similar to
SP:CO02_HUMAN P19075 TUMOR-ASSOCIATED ANTIGEN ;.
ACCESSION R51442
NID g813344
KEYWORDS EST. . . .
SCORES (1) Init1: 78 Initn: 112 Opt: 107 z-score: 171.4 E(): 0.48
23.9% identity in 88 aa overlap
50 60 70 80 90 100 109
Upka_Bovin.S PLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFECA
:| :: :||::: |:||:|||:::|
R51442 VLGCCDTFKERRNLLRLYFILLLIIFLLEII
10 20 30
110 120 130 140 150 160 169
Upka_Bovin.S SCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWV
: | :|:: : : :: : |: :| : :: : :| |::: | :|||::: :|
R51442 AGILAYAYYQQLNTELKENLKDTMTKRYHQPGH-EAVTSAVDQLQQEFHCCGSNNSQDXA
40 50 60 70 80 90
170 180 190 200 210 220 229
Upka_Bovin.S NFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSY
R51442 RQXVDPLHRRPVAXWVPDSLLQGRWWLFVGQRDHCLQHLTRLEGGLHSPSLENFHSGSNL
100 110 120 130 140 150
Upka_Bovin.Swissprot
Gb_Est2:Aa116505
LOCUS AA116505 557 bp mRNA EST 15-NOV-1996
DEFINITION mp94a12.r1 Soares 2NbMT Mus musculus cDNA clone 576862 5' similar
to gb:M37033 LEUKOCYTE SURFACE ANTIGEN CD53 (HUMAN);.
ACCESSION AA116505
NID g1671518
KEYWORDS EST. . . .
SCORES (3) Init1: 72 Initn: 112 Opt: 107 z-score: 169.9 E(): 0.58
20.8% identity in 96 aa overlap
40 50 60 70 80 90
Upka_Bovin.S AETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILT
| :: | ::||| :| ::: : : ::::
Aa116505 CCILGFGIYFLVQNTYGVLFRNLPFLTLGNILVIVGSIIMVVAFLGCMGSIKENKCLLMS
60 70 80 90 100 110
100 110 120 130 140 150
Upka_Bovin.S YLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMI
:::|:||| : | : | ::::: : : : :: : | :|:: : || |:
Aa116505 FFVLLLIILLAEVTIAILLFVYEQKLNTLVAEGLNDSIQHYHSDNS----TMKAWDFIQT
120 130 140 150 160 170
160 170 180 190 200 210
Upka_Bovin.S EQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFT
: :|||:
Aa116505 QLQCCGVMAQXLD
180
Upka_Bovin.Swissprot
Gb_Est3:Celk102h4f
LOCUS CELK102H4F 360 bp mRNA EST 06-DEC-1995
DEFINITION C.elegans cDNA clone yk102h4 : 5' end, single read.
ACCESSION D70406
NID g1106368
KEYWORDS EST(expressed sequence tag).
SOURCE Caenorhabditis elegans (strain CB1489 him-8(e1489), ) (library: . . .
SCORES (2) Init1: 78 Initn: 118 Opt: 103 z-score: 167.3 E(): 0.81
23.1% identity in 104 aa overlap
40 50 60 70 80 90
Upka_Bovin.S FAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMIL
| :: || |::: | ::| : |::
Celk102h4f VNMLSKASKLYLDPTWTLLIGGFLTFIIGFSGCVGSLRENTSFLT
10 20 30 40
100 110 120 130 140 150
Upka_Bovin.S TYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIM
| |: :: | | : : |: || : : : ::: | | :| | : ::
Celk102h4f FYSTLLGLVLIAEFSEGVFEYAWRDQLDNYIRNLLNDVEDGYRDDP----DLQLLIESMQ
50 60 70 80 90 100
160 170 180 190 200 210
Upka_Bovin.S IEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLF
||| :| ||
Celk102h4f ETWMCCGINGADDWDRNT
110
Upka_Bovin.Swissprot
Gb_Est1:Aa073127
LOCUS AA073127 389 bp mRNA EST 04-OCT-1996
DEFINITION mm94e11.r1 Stratagene mouse heart (#937316) Mus musculus cDNA clone
536108 5' similar to SW:CD9_MOUSE P40240 CD9 ANTIGEN. ;.
ACCESSION AA073127
NID g1594927
KEYWORDS EST. . . .
SCORES (1) Init1: 96 Initn: 96 Opt: 103 z-score: 166.5 E(): 0.89
22.3% identity in 103 aa overlap
40 50 60 70 80 90 99
Upka_Bovin.S WVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLIL
| | :::|: :| ::: | :: |:
Aa073127 AETRVEEAVILTYFPVVHPVMIAVCCF-LIIVGMLGYCGTVKRNLLLLAWYFGT
10 20 30 40 50
100 110 120 130 140 150 159
Upka_Bovin.S MLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQEC
:|:|: | | : :| :: :: : | :: : : : | ||: |: :: | :|
Aa073127 LLVIFCVELACGVWTYEQEVMVPVQWSDMVTLKARMTNYGLPRYRWLTHAWNYFQREFKC
60 70 80 90 100 110
160 170 180 190 200 210 219
Upka_Bovin.S CGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCF
||: ||:::|
Aa073127 CGVVYFTDWLEMTEMD
120
Upka_Bovin.Swissprot
Gb_Est2:Aa142522
LOCUS AA142522 490 bp mRNA EST 04-DEC-1996
DEFINITION mq57e11.r1 Soares 2NbMT Mus musculus cDNA clone 582860 5' similar
to WP:F54B3.3 CE03405 ;.
ACCESSION AA142522
NID g1711778
KEYWORDS EST. . . .
SCORES (1) Init1: 89 Initn: 89 Opt: 104 z-score: 166.0 E(): 0.95
31.0% identity in 58 aa overlap
150 160 170 180 190 200
Upka_Bovin.S RLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRL
| | : || | :|::: :| ::||:
Aa142522 SDKSVILGSLARQSPQPRLYRAMEAQTHLGTFPPGAXRWPSLTMERNAQRLPSXRRGCQA
40 50 60 70 80 90
210 220 230 240 250
Upka_Bovin.S GHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL
|:| |: :| || ::| :| : |:
Aa142522 GRLLSLLWRGRPWHIHLRMES-SWKLXWMPVCRMLCSSTSRRCSGLKXRDPIPRPTSRHI
100 110 120 130 140 150
Upka_Bovin.Swissprot
Gb_Est3:H32925
LOCUS H32925 246 bp mRNA EST 08-SEP-1995
DEFINITION EST108471 Rattus sp. cDNA 5' end similar to Leukocyte antigen CD53.
ACCESSION H32925
NID g978342
KEYWORDS EST.
SOURCE rat primer=M13 Reverse library=Rat PC-12 cells, NGF-treated (9 . . .
SCORES (1) Init1: 96 Initn: 96 Opt: 100 z-score: 165.7 E(): 0.99
27.9% identity in 61 aa overlap
40 50 60 70 80 90
Upka_Bovin.S GLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRR
:| |:| : | :|:: :| |:: :||
H32925 LASSTYLATAYILVVAGVVVMVTGVLGCCATFKERR
10 20 30
100 110 120 130 140 150
Upka_Bovin.S SMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLW
::: |:||:|| :::| : | :|:: : :
H32925 NLLRLYFILLLINFLLEIIAGILAYVYYQQLNTELKENLEGHHDQV
40 50 60 70 80
160 170 180 190 200 210
Upka_Bovin.S DRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHL
Upka_Bovin.Swissprot
Gb_Est6:R35615
LOCUS R35615 435 bp mRNA EST 02-MAY-1995
DEFINITION yg66f01.r1 Homo sapiens cDNA clone 38198 5' similar to SP:S39262
S39262 PLATELET CELL SURFACE GLYCOPROTEIN - ;.
ACCESSION R35615
NID g792516
KEYWORDS EST. . . .
SCORES (1) Init1: 103 Initn: 103 Opt: 103 z-score: 165.4 E(): 1
25.0% identity in 76 aa overlap
30 40 50 60 70 80
Upka_Bovin.S LSGLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCR
|: : ::| : | :|:: :| |:: :
R35615 AGWLSWQWASGRWPSRVTTSACWPQDLPGHSYILVVAGTVVMVTGVLGCCATFKE
10 20 30 40 50
90 100 110 120 130 140
Upka_Bovin.S RRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTR
||::: |:||:|||:::| : | :|:: : : :: : |: :|
R35615 RRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNTELKENLKDTMTKRYHQPGHEVVDQR
60 70 80 90 100 110
150 160 170 180 190 200
Upka_Bovin.S LWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLG
R35615 CGTSLQQGIPLLLAANKLQGIGETVSWDTV
120 130 140
Upka_Bovin.Swissprot
Gb_Est2:Aa133983
LOCUS AA133983 591 bp mRNA EST 27-NOV-1996
DEFINITION zn88c11.r1 Stratagene lung carcinoma 937218 Homo sapiens cDNA clone
565268 5' similar to SW:A15_HUMAN P41732 CELL SURFACE GLYCOPROTEIN
A15 ;.
ACCESSION AA133983
NID g1691069 . . .
SCORES (1) Init1: 63 Initn: 94 Opt: 104 z-score: 164.2 E(): 1.2
28.6% identity in 105 aa overlap
120 130 140 150 160 170
Upka_Bovin.S HRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFR
:| | :: : :||| : || | |: |:
Aa133983 EVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWEN-TDWFK
10 20 30 40 50
180 190 200 210 220 230
Upka_Bovin.S ATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWF
| : | | |||:|:: | :| |:| : |:::|| : : :: : |
Aa133983 ETKNQSV---PLSCCRETAS----NCNG-SLAHPSDLYAEGCEALVVKKLQEIMMHVIWA
60 70 80 90 100
240 250
Upka_Bovin.S GFAILMWTLPVMLIAMYFYTTL
::|: | || |
Aa133983 ALAFAAIQLLGMLCACIVLCRRSRDPAYELLITGGTYAXLTTLAXAFWSCSDLEGELSRS
110 120 130 140 150 160
Upka_Bovin.Swissprot
Gb_Est8:T79690
LOCUS T79690 269 bp mRNA EST 15-MAR-1995
DEFINITION yd71d05.r1 Homo sapiens cDNA clone 113673 5' similar to contains
OFR repetitive element ;.
ACCESSION T79690
NID g698199
KEYWORDS EST. . . .
SCORES (3) Init1: 65 Initn: 65 Opt: 99 z-score: 163.2 E(): 1.4
33.3% identity in 66 aa overlap
110 120 130 140 150 160
Upka_Bovin.S CASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDR----IMIEQECCGTS
::| || | || | ::: :| ||
T79690 SXENRSESVQGWEEKXLWRRCHNYLLVTSEVQGTL
10 20 30
170 180 190 200 210 220
Upka_Bovin.S GPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIG
| |:: :| : | :: ||| ||: | ||
T79690 GHTVWISRNS-WVAEQHMAADPWPLTLCREYGPTIPXRWAQEGLGEPFTGAGVFK
40 50 60 70 80
230 240 250
Upka_Bovin.S HAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL
Upka_Bovin.Swissprot
Gb_Est6:N89259
LOCUS N89259 234 bp mRNA EST 02-APR-1996
DEFINITION K8678F Fetal heart, Lambda ZAP Express Homo sapiens cDNA clone
K8678 5' similar to OCULAR MELANOMA-ASSOCIATED ANTIGEN.
ACCESSION N89259
NID g1442589
KEYWORDS EST. . . .
SCORES (2) Init1: 98 Initn: 98 Opt: 98 z-score: 162.9 E(): 1.4
25.4% identity in 59 aa overlap
120 130 140 150 160 170
Upka_Bovin.S HRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFR
| : ||:: : :|||::: || :: | :
N89259 QPLLAMCLEIRXCQSLITTSILDRMQADFKCCGAANYTDWEKIPSMSK
10 20 30 40
180 190 200 210 220 230
Upka_Bovin.S ATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWF
: :|: : | : | :::|||
N89259 TRVPDSCCINVTVGCGINFNEKALHKEGC
50 60 70
Upka_Bovin.Swissprot
Gb_Est1:Aa034695
LOCUS AA034695 599 bp mRNA EST 23-AUG-1996
DEFINITION mi41g01.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 466128 5' similar to gb:X53795_rna1 INDUCIBLE MEMBRANE
PROTEIN R2 (HUMAN); gb:D14883 Mouse mRNA for C33/R2/IA4, complete
cds (MOUSE);.
ACCESSION AA034695 . . .
SCORES (3) Init1: 63 Initn: 102 Opt: 103 z-score: 162.3 E(): 1.5
23.0% identity in 87 aa overlap
10 20 30 40 50
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALFAETVWVTADQYRIYPLMGVSGKD
:| : |::::: | :::: ||: ||: : :: :| ::
Aa034695 XTGCSRTCRMGAGCVKVTKYFLFLFNLLFFILGAVILGFGVWILADKNSFISVLQTS-SS
10 20 30 40 50
60 70 80 90 100 110
Upka_Bovin.S DVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFECASCITSYTHR
:: :||:: | | :|:: :| :|: : | :: |::::|:| |
Aa034695 SLQVGAYVFIGVGAITIVMGFLGCIGAVNEVRCLLGLYFVFLLLILIAQVTVGVLFXFNA
60 70 80 90 100 110
120 130 140 150 160 170
Upka_Bovin.S DYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRAT
Aa034695 DKLEEWRWGTQXLTSFATXTAIGHKXPPRGLGLRSSASQSAVAGXPIQLDRERRAHGLIQ
120 130 140 150 160 170
Upka_Bovin.Swissprot
Gb_Est10:W96413
LOCUS W96413 468 bp mRNA EST 29-NOV-1996
DEFINITION ze10g12.r1 Soares fetal heart NbHH19W Homo sapiens cDNA clone
358630 5' similar to gb:M33680 CD81 ANTIGEN (HUMAN);.
ACCESSION W96413
NID g1426331
KEYWORDS EST. . . .
SCORES (2) Init1: 72 Initn: 101 Opt: 101 z-score: 161.3 E(): 1.7
19.6% identity in 107 aa overlap
40 50 60 70 80 90
Upka_Bovin.S GLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRR
::| :| | | :: |: :| :|: : :
W96413 SPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQ
10 20 30
100 110 120 130 140
Upka_Bovin.S SMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQML--TFYSADSNQGRELTR
:: |:: ::|:: | |: :::::| :::: : : | | : : |:|::: :::
W96413 CLLGTFFTCLVILFACEVAAESRGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVK
40 50 60 70 80 90
150 160 170 180 190 200
Upka_Bovin.S LWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLG
: : : :|||:| |
W96413 TFHETL---DCCGSSTPDLLXPPQVLKNNLVSLGAATSSGNLFKGGLPPERSMTSSTGKL
100 110 120 130 140 150
Upka_Bovin.Swissprot
Gb_Est9:W78208
LOCUS W78208 428 bp mRNA EST 17-OCT-1996
DEFINITION zd68e02.r1 Soares fetal heart NbHH19W Homo sapiens cDNA clone
345818 5' similar to gb:M38690 CD9 ANTIGEN (HUMAN);.
ACCESSION W78208
NID g1388240
KEYWORDS EST. . . .
SCORES (1) Init1: 96 Initn: 96 Opt: 100 z-score: 160.4 E(): 1.9
25.8% identity in 62 aa overlap
40 50 60 70 80 90
Upka_Bovin.S GLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRR
::|::| | | :::|: :| :|: : :
W78208 RFDSQTKSIFEQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQ
10 20 30 40 50
100 110 120 130 140 150
Upka_Bovin.S SMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLW
|: :: ::|:|: :| |: | :|:|:| :::
W78208 CMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVHGVLQRTPTTSXKPRMSPSGKTLKA
60 70 80 90 100 110
160 170 180 190 200 210
Upka_Bovin.S DRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHL
W78208 NPLCVELLWFGWGRGTVYLRHLPQEGRTRNL
120 130 140
Upka_Bovin.Swissprot
Gb_Est9:W53701
LOCUS W53701 659 bp mRNA EST 03-JUN-1996
DEFINITION md15a08.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 368438 5' similar to gb:M33680 CD81 ANTIGEN (HUMAN);.
ACCESSION W53701
NID g1357545
KEYWORDS EST. . . .
SCORES (3) Init1: 79 Initn: 107 Opt: 102 z-score: 159.7 E(): 2.1
20.0% identity in 140 aa overlap
10 20 30
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALF
| :| : : || : |::: |:| :::
W53701 APGYLPVPDPGTASPYRPLQDQSKLRRPRTAMGVEGCTKCIKYLLFVFNFVFWLAGGVIL
40 50 60 70 80 90
40 50 60 70 80 90
Upka_Bovin.S AETVWVTADQYR---IYPLMGVSGKDDVF-AGAWIAIFCGFSFFVVASFGVGAALCRRRS
: ::|: | :| :| : ::| :| :| | | :: |: :| :|: : :
W53701 GVALWLRHDPQTTSLLYLELGNKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQC
100 110 120 130 140 150
100 110 120 130 140 150
Upka_Bovin.S MILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWD
:: |:: ::|:: | |: | :::::| :::: : : :| |: |::
W53701 LLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVNKFYEQALXQAVMDDDATMQGCVEDS
160 170 180 190 200 210
160 170 180 190 200 210
Upka_Bovin.S RIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLD
W53701 MRSSMLWL
Upka_Bovin.Swissprot
Gb_Est9:W27019
LOCUS W27019 555 bp mRNA EST 08-MAY-1996
DEFINITION 19c2 Human retina cDNA randomly primed sublibrary Homo sapiens
cDNA.
ACCESSION W27019
NID g1306391
KEYWORDS EST. . . .
SCORES (3) Init1: 82 Initn: 106 Opt: 101 z-score: 159.7 E(): 2.1
19.6% identity in 102 aa overlap
40 50 60 70 80 90
Upka_Bovin.S LFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMI
| : | | :|::: :| |:: : | :
W27019 AGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFIIGLIGCCATIRESRCGL
50 60 70 80 90 100
100 110 120 130 140 150
Upka_Bovin.S LTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRI
|::|::|::: | : : :|::| : :: : :::: |:: : :: :| | :
W27019 ATFVIILLLVFGTEVVVVVLGYVYRAKVENEVDRSIQKVFKTYNGTNPDAD--SRDIDYV
110 120 130 140 150 160
160 170 180 190 200 210
Upka_Bovin.S MIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYL
: : :| |::||:
W27019 QRKLNCRGSNGPFXKKKKKKKK
170 180
Upka_Bovin.Swissprot
Gb_Est9:W80241
LOCUS W80241 502 bp mRNA EST 25-JUN-1996
DEFINITION me91g05.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 402968 5' similar to gb:D16432 Mouse murine CD63 mRNA for
murine homologue of CD63/ME491, complete (MOUSE);.
ACCESSION W80241
NID g1391242 . . .
SCORES (1) Init1: 91 Initn: 91 Opt: 100 z-score: 158.9 E(): 2.4
22.3% identity in 94 aa overlap
90 100 110 120 130 140
Upka_Bovin.S VGAALCRRRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSN
|::|: || : |: : :|:: | |:
W80241 VAIAGYVFRDQVKSEFNKSFQQQMQNYLKDN-
10 20 30
150 160 170 180 190 200
Upka_Bovin.S QGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVN
: : : |::: |::|||:|: || |: : : :|: : | : ::
W80241 ---KTATILDKLQKENNCCGASNYTDWENIPGMAKDRVPDSCCINITVGCGNDFKESTIH
40 50 60 70 80
210 220 230 240 250
Upka_Bovin.S EEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL
:||
W80241 TQGCVETIAIWLRKNILLVAAAALGIAFVEVLGIIFSCCLVKSIRSGYEVMXGWGAFGLF
90 100 110 120 130 140
Upka_Bovin.Swissprot
Gb_Est9:W11956
LOCUS W11956 637 bp mRNA EST 05-SEP-1996
DEFINITION ma79f09.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone 316937 5'
similar to gb:M58485 CD63 ANTIGEN (HUMAN);.
ACCESSION W11956
NID g1286260
KEYWORDS EST. . . .
SCORES (2) Init1: 90 Initn: 114 Opt: 100 z-score: 156.6 E(): 3.2
25.6% identity in 121 aa overlap
40 50 60 70 80 90
Upka_Bovin.S FAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGF--SFFVVASFGVGAALCRRRSM
|:|: || | : |: : | ::
W11956 GLLRLCSGIDRHWCSGSGCLEAGHYPXDYCWLAVACGHHCSGCLPLPGGLCGLLWGLQGE
20 30 40 50 60 70
100 110 120 130 140 149
Upka_Bovin.S ILTY-LILMLIIYIFEC-ASC-ITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRL
:|:: | | : | ::| |::|: || : |: : :|:: | |: : : :
W11956 LLSHDYICHLPVSYHACGGGCGIAGYVFRDQVKSEFNKSFQQQMQNYLKDN----KTATI
80 90 100 110 120
150 160 170 180 190 200 209
Upka_Bovin.S WDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGH
|::: |::|||:|: || |: : |: :|
W11956 LDKLQKENNCCGASNYTDWENIPGDARTESPILAASTXLWAVGMIRRIDYQYPGRAXDYS
130 140 150 160 170 180
210 220 230 240 250
Upka_Bovin.S LDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL
W11956 NMAMEDILVVRXGPWRLVLCMHWDY
190 200 210
Upka_Bovin.Swissprot
Gb_Est9:W14643
LOCUS W14643 452 bp mRNA EST 12-SEP-1996
DEFINITION mb30d06.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone 330923 5'
similar to gb:D14883 Mouse mRNA for C33/R2/IA4, complete cds
(MOUSE);.
ACCESSION W14643
NID g1537833 . . .
SCORES (1) Init1: 59 Initn: 97 Opt: 98 z-score: 156.5 E(): 3.2
21.8% identity in 87 aa overlap
10 20 30 40
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALFAETVWVTADQYRI
:| : |::::: | :::: ||: ||: :
W14643 AGLIARTRTQAPCCSRTCRMGAGCVKVDKYFLFLFNLLFFILGAVILGFGVWILADKNSF
20 30 40 50 60 70
50 60 70 80 90 100
Upka_Bovin.S YPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFEC
:: :| :::: :||:: | | :|:: :: :|: : | :: |::::|:| |
W14643 ISVLQTS-SSSLQVGAYVFIGVGAITIVIGFLSCIGAVNEVRCLLGLYFVFLLLILIAQV
80 90 100 110 120 130
110 120 130 140 150 160
Upka_Bovin.S ASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDW
W14643 TVGSSSTSTLTSXRSRW
140 150
Upka_Bovin.Swissprot
Gb_Est1:Aa035756
LOCUS AA035756 346 bp mRNA EST 23-AUG-1996
DEFINITION zk28e05.r1 Soares pregnant uterus NbHPU Homo sapiens cDNA clone
471872 5' similar to gb:M58485 CD63 ANTIGEN (HUMAN);.
ACCESSION AA035756
NID g1507584
KEYWORDS EST. . . .
SCORES (2) Init1: 96 Initn: 96 Opt: 96 z-score: 155.6 E(): 3.6
25.0% identity in 60 aa overlap
120 130 140 150 160 170
Upka_Bovin.S THRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAF
| | ||:: : :|||::: :| :: |
Aa035756 QSLITTSGSRWRITRKTTTLLRSLDRMQADFKCCGAANYTNWEKIPSMS
10 20 30 40
180 190 200 210 220 230
Upka_Bovin.S RATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISW
: :|: : | : | :::|||
Aa035756 KNRVPDSCCINVTVGCGINFNEKAIHKEGCVREDWGLAEEKCAWWXAAAAPLEFLFVEVX
50 60 70 80 90 100
Upka_Bovin.Swissprot
Gb_Est2:Aa134728
LOCUS AA134728 416 bp mRNA EST 29-NOV-1996
DEFINITION zm79e04.r1 Stratagene neuroepithelium (#937231) Homo sapiens cDNA
clone 531870 5' similar to gb:M58485 CD63 ANTIGEN (HUMAN);.
ACCESSION AA134728
NID g1695305
KEYWORDS EST. . . .
SCORES (3) Init1: 88 Initn: 88 Opt: 97 z-score: 155.6 E(): 3.6
22.3% identity in 94 aa overlap
90 100 110 120 130 140
Upka_Bovin.S VGAALCRRRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSN
|::|: || : |: : :|:: | |:
Aa134728 SYHACGGGCGIAGYVFRDQVKSEFNKSFQQQMQNYLKDN-
10 20 30
150 160 170 180 190 200
Upka_Bovin.S QGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVN
: : : |::: |::|||:|: || |: : :|: : | : ::
Aa134728 ---KTATILDKLQKENNCCGASNYTDWENIPRHGKDRVPDSCCINITVGCGNDFKESTIH
40 50 60 70 80 90
210 220 230 240 250
Upka_Bovin.S EEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL
:||
Aa134728 TQGCVETIAIWLRKNILLVAAAALGICFCGGLGNYLLLLVWX
100 110 120 130
Upka_Bovin.Swissprot
Gb_Est3:C05069
LOCUS C05069 448 bp mRNA EST 24-JUL-1996
DEFINITION Human Heart cDNA, clone 3NHC4571.
ACCESSION C05069
NID g1468320
KEYWORDS EST(expressed sequence tag).
SOURCE Homo sapiens Adult Heart cDNA to mRNA. . . .
SCORES (2) Init1: 96 Initn: 96 Opt: 97 z-score: 154.8 E(): 4
22.3% identity in 94 aa overlap
90 100 110 120 130 140
Upka_Bovin.S VGAALCRRRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSN
|::|: || :: : : :|:: | :::
C05069 ATIAGYVFRDKVMLEFNNNFRQQMENYPKNNH
10 20 30
150 160 170 180 190 200
Upka_Bovin.S QGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVN
: | ||:: : :|||::: || :: | : :|: : | : | ::
C05069 TASIL----DRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCINVTVGCGINFNEKAIH
40 50 60 70 80
210 220 230 240 250
Upka_Bovin.S EEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL
:|||
C05069 KEGCVEKIGGWLRKNVLVVAAAALGIAFIEVLGIVFACCLVKSIRSGYEVMXGSGLSASS
90 100 110 120 130 140
Upka_Bovin.Swissprot
Gb_Est9:W20733
LOCUS W20733 381 bp mRNA EST 10-SEP-1996
DEFINITION mb96g04.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone 337302 5'
similar to SW:CD53_HUMAN P19397 LEUKOCYTE SURFACE ANTIGEN CD53. [1]
;.
ACCESSION W20733
NID g1297775 . . .
SCORES (1) Init1: 73 Initn: 103 Opt: 96 z-score: 154.6 E(): 4.1
22.5% identity in 89 aa overlap
10 20 30 40
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMGNIIILLSGLALFAETVWVTADQYRI
|: |::: |:| :::: :|::| | :
W20733 XGQDLDXRLLVARELKRCSMARGCLQGVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGNF
10 20 30 40 50 60
50 60 70 80 90 100
Upka_Bovin.S YPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFEC
| |:: :::| : | | :::: | :|| : : ::||:::|:|:::::|
W20733 ATL---SSSFPSLSAANLLIVTGTFVMAIGFVGCIGALKENKCLLLTFFVLLLLVFLLEA
70 80 90 100 110 120
110 120 130 140 150 160
Upka_Bovin.S ASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDW
W20733 TLLCSSL
Upka_Bovin.Swissprot
Gb_Est9:W75963
LOCUS W75963 462 bp mRNA EST 16-OCT-1996
DEFINITION zd59d08.r1 Soares fetal heart NbHH19W Homo sapiens cDNA clone
344943 5' similar to gb:M58485 CD63 ANTIGEN (HUMAN);.
ACCESSION W75963
NID g1386337
KEYWORDS EST. . . .
SCORES (3) Init1: 96 Initn: 96 Opt: 96 z-score: 152.8 E(): 5.1
25.5% identity in 55 aa overlap
130 140 150 160 170 180
Upka_Bovin.S MVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTP
||:: : :|||::: || :: | : :|
W75963 NFRQQMENYPKNNHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVP
10 20 30 40
190 200 210 220 230 240
Upka_Bovin.S EVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAI
: : | : | :::|||
W75963 DSCCINVTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACC
50 60 70 80 90 100
Upka_Bovin.Swissprot
Gb_Est3:H04602
LOCUS H04602 150 bp mRNA EST 20-JUN-1995
DEFINITION yj49f03.s1 Homo sapiens cDNA clone 152093 3' similar to contains
MIR repetitive element ;.
ACCESSION H04602
NID g867535
KEYWORDS EST. . . .
SCORES (4) Init1: 89 Initn: 89 Opt: 89 z-score: 151.8 E(): 5.9
33.3% identity in 33 aa overlap
130 140 150 160 170 180
Upka_Bovin.S TKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPP
|||: |: :|:| | :::|: :|
H04602 CCGVRLPLAFVTFFSYVPTXNPKXFLPGXH
10 20 30
190 200 210 220 230 240
Upka_Bovin.S LCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVM
||
H04602 TCCLPHPIKNRFFSYXVLC
40
Upka_Bovin.Swissprot
Gb_Est2:Aa106685
LOCUS AA106685 416 bp mRNA EST 01-NOV-1996
DEFINITION ml83h08.r1 Stratagene mouse kidney (#937315) Mus musculus cDNA
clone 518655 5' similar to gb:M33680 CD81 ANTIGEN (HUMAN);.
ACCESSION AA106685
NID g1656492
KEYWORDS EST. . . .
SCORES (2) Init1: 77 Initn: 77 Opt: 94 z-score: 150.4 E(): 7
19.0% identity in 105 aa overlap
40 50 60 70 80 90
Upka_Bovin.S GLALFAETVWVTADQYRIYPLMGVSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRR
::| :| | | :: |: :| :|: : :
Aa106685 LLYLELGNKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQ
10 20 30 40
100 110 120 130 140
Upka_Bovin.S SMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQML--TFYSADSNQGRELTR
:: |:: ::|:: | |: | :::::| :::: : : | | : :: |:|::: :::
Aa106685 CLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVMDDDANNAKAVVK
50 60 70 80 90 100
150 160 170 180 190 200
Upka_Bovin.S LWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLG
: : : :|||:::
Aa106685 TFHETL---NCCGSNALTTLTTTILRNSLCPSGGNI
110 120 130
Upka_Bovin.Swissprot
Gb_Est9:W58053
LOCUS W58053 611 bp mRNA EST 15-OCT-1996
DEFINITION zd22d12.r1 Soares fetal heart NbHH19W Homo sapiens cDNA clone
341399 5'.
ACCESSION W58053
NID g1364766
KEYWORDS EST. . . .
SCORES (5) Init1: 96 Initn: 118 Opt: 96 z-score: 150.2 E(): 7.2
44.4% identity in 27 aa overlap
130 140 150 160 170 180
Upka_Bovin.S LITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPW
|:|||:: :| :||: |: ||||
W58053 LTPVXSLSKIALATAKKLEKNFSCNVSTDIQRCCGSACTTNWCKFTAICRGGPPEVVSVX
10 20 30 40 50 60
190 200 210 220 230 240
Upka_Bovin.S PPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLP
W58053 WNLLGVSSPKNIFLALSHYKXQKXSXIIYSLQVLLSPTXHIFPXLCSKRKGEIHTDQMPR
70 80 90 100 110 120
Upka_Bovin.Swissprot
Gb_Est3:H33147
LOCUS H33147 307 bp mRNA EST 08-SEP-1995
DEFINITION EST108860 Rattus sp. cDNA 5' end similar to Motility-related
protein MRP-1.
ACCESSION H33147
NID g978564
KEYWORDS EST. . . .
SCORES (3) Init1: 85 Initn: 85 Opt: 92 z-score: 150.0 E(): 7.4
24.7% identity in 93 aa overlap
10 20 30 40 50
Upka_Bovin.S MASAAAATTEKGSPVVVGLLVMG-NIIILLSGLALFAETVWVTADQYRIYPLMG
|| | : ||: : |::| |:|: |:|:|::| :|: |: :
H33147 RAYLLSHASPACTMPVKGGSKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQ
10 20 30 40 50 60
60 70 80 90 100 110
Upka_Bovin.S VSGKDDVFAGAWIAIFCGFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFECASCIT
::::: ::|::| | | :::|: :| :|: : : |:
H33147 ETNHSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLG
70 80 90 100
120 130 140 150 160 170
Upka_Bovin.S SYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTS
Upka_Bovin.Swissprot
Gb_Est1:Aa046578
LOCUS AA046578 461 bp mRNA EST 06-SEP-1996
DEFINITION zk62c08.r1 Soares pregnant uterus NbHPU Homo sapiens cDNA clone
487406 5'.
ACCESSION AA046578
NID g1524494
KEYWORDS EST. . . .
SCORES (6) Init1: 85 Initn: 85 Opt: 94 z-score: 149.5 E(): 7.9
23.6% identity in 55 aa overlap
90 100 110 120 130 140
Upka_Bovin.S RRRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELT
: ::|:|| :::: :: ::
Aa046578 VYLNGIPRRKWLVMDKIQKCFPQRWVVFKKFQVTNPCRKHXCPTHXFAVQETRVFQVP
10 20 30 40 50
150 160 170 180 190 200
Upka_Bovin.S RLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRL
| | |: ||: ||:||:: |
Aa046578 RGWGSPTIKFLCCNQEGPLDWIGSTWELYTISHNGWQCKRXSKXPSEETSTXKRQKRSXT
60 70 80 90 100 110
Upka_Bovin.Swissprot
Gb_Est9:W55990
LOCUS W55990 387 bp mRNA EST 15-OCT-1996
DEFINITION zd15b06.r1 Soares fetal heart NbHH19W Homo sapiens cDNA clone
340691 5' similar to SW:CD63_HUMAN P08962 CD63 ANTIGEN ;.
ACCESSION W55990
NID g1357879
KEYWORDS EST. . . .
SCORES (2) Init1: 85 Initn: 85 Opt: 93 z-score: 149.4 E(): 8
36.2% identity in 47 aa overlap
100 110 120 130 140 150 159
Upka_Bovin.S MLIIYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADSNQGRELTRLWDRIMIEQEC
|: | :|::: | | || |: |: : :|
W55990 ANTDKIDRYAQQDLKKGLHLYGTQENVG--LTNAWSIIQTDFRC
10 20 30 40
160 170 180 190 200 210 219
Upka_Bovin.S CGTSGPMDWVNFTSAFRATTPEVVFPWPPLCCRRTGNFIPVNEEGCRLGHLDYLFTKGCF
||:|: || : :| |
W55990 CGVSNYTDWFEVYNATRLPDSCCLEFSESCGLHAPAPGGRRRATRRXRCGFRRTCWLWAS
50 60 70 80 90 100
Upka_Bovin.Swissprot
Gb_Est9:W40803
LOCUS W40803 464 bp mRNA EST 20-MAY-1996
DEFINITION mc67g04.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone 353622 5' similar to gb:L08115 Mus musculus antigen (MOUSE);.
ACCESSION W40803
NID g1325266
KEYWORDS EST. . . .
SCORES (2) Init1: 62 Initn: 101 Opt: 94 z-score: 149.4 E(): 8
23.9% identity in 67 aa overlap
80 90 100 110 120 130
Upka_Bovin.S GFSFFVVASFGVGAALCRRRSMILTYLILMLIIYIFECASCITSYTHRDYMVSNPSLITK
|:|: :| :: : :|||:| :::: : : |
W40803 LVIFAIEIGAAVWGYTHKDEVIKELQEFYK
10 20 30
140 150 160 170 180 190
Upka_Bovin.S QMLTFYSADSNQGRELTRLWDRIMIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPLC
: : :: || : | : :||| :||::
W40803 DTYQKLRSKDEPQRETLK---AIHMALDCCGIAGPLEQFISDTCPKKQLLESFQVKPCPE
40 50 60 70 80
200 210 220 230 240 250
Upka_Bovin.S CRRTGNFIPVNEEGCRLGHLDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLI
W40803 AISEVFNNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRVREMVXSLPNSEQEQRHXRL
90 100 110 120 130 140
Upka_Bovin.Swissprot
Gb_Est8:T47440
LOCUS T47440 373 bp mRNA EST 08-FEB-1995
DEFINITION yb13h05.r1 Homo sapiens cDNA clone 71097 5'.
ACCESSION T47440
NID g649421
KEYWORDS EST.
SOURCE human clone=71097 library=Stratagene placenta (#937225) . . .
SCORES (1) Init1: 88 Initn: 88 Opt: 92 z-score: 148.0 E(): 9.6
42.4% identity in 33 aa overlap
160 170 180 190 200 210
Upka_Bovin.S MIEQECCGTSGPMDWVNFTSAFRATTPEVVFPWPPL--CCRRTGNFIPVNEEGCRLGHLD
:| | | || ||: |: ::: || || :
T47440 INAALDPHPDHTLTAGSAVAHPSGWPGTQDWPQPTLSACCARTSCFLLLTNPGCDLGDAE
10 20 30 40 50 60
220 230 240 250
Upka_Bovin.S YLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFYTTL
:||
T47440 FLFWVLGEAAGRSRQMIKLPLCCHLXIELRQGGWGTWGAIAEAVGDELRLQVILLGQRKS
70 80 90 100 110 120
! CPU time used: ! Database scan: 0:25:09.5 ! Post-scan
processing: 0:00:02.0 ! Total CPU time: 0:25:11.5 ! Output
File: Upka_Bovin.Tfasta