Sequencing Exercise

Lets keep this short and sweet:

Here are 16 short sequences.

Copy them to text files in a new sub-directory of your RCR account.

Use the GCG fragment assembly tools to assemble them into a single contig. (GELSTART, GELENTER, GELMERGE)

Use GELASSEMBLE to view and edit your contig, then save the consensus sequence as a text file.



>Yu2.seq  Length: 61  March 21, 1995 15:30  Type: N  Check: 8358  ..
ctgcaaacca aaaacagcaa acctgcaata tagtcttacc ccagttactt 
aatcccctgc g
>Yaping2.Seq  Length: 61  March 23, 1995 10:14  Type: N  Check: 7473  ..
ATCGTTAGCT CTGaAACGCC TATGAACAAG TACAAAGAGG CCTTCGCTTG 
CAGCGGCCAA A
>Wayne2.Seq  Length: 61  March 23, 1995 10:14  Type: N  Check: 5272  ..
CCTTCGCTTG CAGCGGCCAA AGCCGCGCCG CTCAGAATTT AAAAGTACCA 
CCACGCAATG C      
>Tony2.Seq  Length: 61  March 23, 1995 10:14  Type: N  Check: 4770  ..
agttatccac ataaatccgc aaataaagag ttttaagaag ctgcaaacca 
aaaacagcaa a
>Tong2.Seq Length: 61 March 23, 1995 10:14 Type: N Check: 4770 .. AGTTATCCAC ATAAATCCGC AAATAAAGAG TTTTAAGAAG CTGCAAACCA AAAACAGCAA >Stevenp2.Seq Length: 61 March 23, 1995 15:57 Type: N Check: 8358 .. CTGCAAACCA AAAACAGCAA ACCTGCAATA TAGTCTTACC CCAGTTaCTT AATCCCCTGC >Steve2.Seq Length: 61 March 23, 1995 10:14 Type: N Check: 8539 .. AACCACCTGA AATATCCTCA TCTGGCCATA TCTGGCCACA AAGTCACTCC CCTGTCGTCA G >Lora2.Seq Length: 61 March 23, 1995 10:14 Type: N Check: 7473 .. ATCGTTAGCT CTGaAACGCC TATGAACAAG TACAAAGAGG CCTTCGCTTG CAGCGGCCAA A >Lin2.Seq Length: 61 March 23, 1995 10:14 Type: N Check: 7076 .. GGCTTTCGGC GATGGTTCCG TTCGACCAGA AACTCCCCGT AACCACCTGA AATATCCTCA T >Liang2.Seq Length: 61 March 23, 1995 10:14 Type: N Check: 7076 .. GGCTTTCGGC GATGGTTCCG TTCGACCAGA AACTCCCCGT AACCACCTGA AATATCCTCA T >Jing2.Seq Length: 61 March 23, 1995 10:14 Type: N Check: 8539 .. AACCACCTGA AATATCCTCA TCTGGCCATA TCTGGCCACA AAGTCACTCC CCTGTCGTCA G >Hsiao2.Seq Length: 61 March 23, 1995 10:19 Type: N Check: 9948 .. AAGTCACTCC CCTGTCGTCA GAATGTGGCC ACGTCGTTTC AGTTATCCAC ATAAATCCGC A >Graciana2.Seq Length: 61 March 23, 1995 10:15 Type: N Check: 7317 .. tcagaattta aaagtacctc caccgcaagc ggcgggcccc gaccggagcc attttagtta c >Daoji2.Seq Length: 61 March 23, 1995 10:14 Type: N Check: 703 .. CCAGTTaCTT AATCCCCTGC GTTGCTTCGC CTCAGGGAAA GTCTTTATCT CTGaAACGCC T >Basima2.Seq Length: 60 March 23, 1995 10:14 Type: N Check: 8875 .. GCACTAGACA GCACCATTTC CTCAGCACTG AATCATCGCC AGCCTCCGGG GCTTTCGGCG >Andrew2.Seq Length: 61 March 23, 1995 10:14 Type: N Check: 5272 .. ccttcgcttg cagcggccaa agccgcgccg ctcagaattt aaaagtacca ccacgcaatg c