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All data from NYU Health Sciences Library Faculty Bibliography — -
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http://hsl.med.nyu.edu/faculty-bibliography-search [6]
A chromatin link to caste identity in the carpenter ant Camponotus floridanus
Simola, Daniel F; Ye, Chaoyang; Mutti, Navdeep S; Dolezal, Kelly; Bonasio, Roberto; Liebig, Jurgen; Reinberg, Danny; Berger, Shelley L
2013 Mar;23(3):486-496, Genome research
—
id: 249632,
year: 2013,
vol: 23,
page: 486,
stat: Journal Article,
SFMBT1 functions with LSD1 to regulate expression of canonical histone genes and chromatin-related factors
Zhang, Jin; Bonasio, Roberto; Strino, Francesco; Kluger, Yuval; Holloway, J Kim; Modzelewski, Andrew J; Cohen, Paula E; Reinberg, Danny
2013 Apr;27(7):749-766, Genes & development
—
id: 301372,
year: 2013,
vol: 27,
page: 749,
stat: Journal Article,
The role of PR-Set7 in replication licensing depends on Suv4-20h
Beck, David B; Burton, Adam; Oda, Hisanobu; Ziegler-Birling, Celine; Torres-Padilla, Maria-Elena; Reinberg, Danny
2012 Dec;26(23):2580-2589, Genes & development
—
id: 197362,
year: 2012,
vol: 26,
page: 2580,
stat: Journal Article,
PR-Set7 and H4K20me1: at the crossroads of genome integrity, cell cycle, chromosome condensation, and transcription
Beck, David B; Oda, Hisanobu; Shen, Steven S; Reinberg, Danny
2012 Feb;26(4):325-337, Genes & development
—
id: 157486,
year: 2012,
vol: 26,
page: 325,
stat: Journal Article,
Genome-wide and Caste-Specific DNA Methylomes of the Ants Camponotus floridanus and Harpegnathos saltator
Bonasio, Roberto; Li, Qiye; Lian, Jinmin; Mutti, Navdeep S; Jin, Lijun; Zhao, Hongmei; Zhang, Pei; Wen, Ping; Xiang, Hui; Ding, Yun; Jin, Zonghui; Shen, Steven S; Wang, Zongji; Wang, Wen; Wang, Jun; Berger, Shelley L; Liebig, Jurgen; Zhang, Guojie; Reinberg, Danny
2012 Oct;22(19):1755-1764, Current biology. CB
—
id: 180077,
year: 2012,
vol: 22,
page: 1755,
stat: Journal Article,
Fcp1 Dephosphorylation of the RNA Polymerase II C-Terminal Domain Is Required for Efficient Transcription of Heat Shock Genes
Fuda, Nicholas J; Buckley, Martin S; Wei, Wenxiang; Core, Leighton J; Waters, Colin T; Reinberg, Danny; Lis, John T
2012 Sep;32(17):3428-3437, Molecular & cellular biology
—
id: 178177,
year: 2012,
vol: 32,
page: 3428,
stat: Journal Article,
PCGF Homologs, CBX Proteins, and RYBP Define Functionally Distinct PRC1 Family Complexes
Gao, Zhonghua; Zhang, Jin; Bonasio, Roberto; Strino, Francesco; Sawai, Ayana; Parisi, Fabio; Kluger, Yuval; Reinberg, Danny
2012 Feb;45(3):344-356, Molecular cell
—
id: 158669,
year: 2012,
vol: 45,
page: 344,
stat: Journal Article,
SIRT3 Functions in the Nucleus in the Control of Stress-Related Gene Expression
Iwahara, Toshinori; Bonasio, Roberto; Narendra, Varun; Reinberg, Danny
2012 Dec;32(24):5022-5034, Molecular & cellular biology
—
id: 184892,
year: 2012,
vol: 32,
page: 5022,
stat: Journal Article,
Crystal Structure of TDRD3 and Methyl-Arginine Binding Characterization of TDRD3, SMN and SPF30
Liu, Ke; Guo, Yahong; Liu, Haiping; Bian, Chuanbing; Lam, Robert; Liu, Yongsong; Mackenzie, Farrell; Rojas, Luis Alejandro; Reinberg, Danny; Bedford, Mark T; Xu, Rui-Ming; Min, Jinrong
2012 ;7(2):e30375-e30375 e30375, PLoS ONE
—
id: 159300,
year: 2012,
vol: 7,
page: e30375,
stat: Journal Article,
EZH2 couples pancreatic regeneration to neoplastic progression
Mallen-St Clair, Jon; Soydaner-Azeloglu, Rengin; Lee, Kyoung Eun; Taylor, Laura; Livanos, Alexandra; Pylayeva-Gupta, Yuliya; Miller, George; Margueron, Raphael; Reinberg, Danny; Bar-Sagi, Dafna
2012 Mar;26(5):439-444, Genes & development
—
id: 159852,
year: 2012,
vol: 26,
page: 439,
stat: Journal Article,
Prdm3 and Prdm16 are H3K9me1 Methyltransferases Required for Mammalian Heterochromatin Integrity
Pinheiro, Ines; Margueron, Raphael; Shukeir, Nicholas; Eisold, Michael; Fritzsch, Christoph; Richter, Florian M; Mittler, Gerhard; Genoud, Christel; Goyama, Susumu; Kurokawa, Mineo; Son, Jinsook; Reinberg, Danny; Lachner, Monika; Jenuwein, Thomas
2012 Aug;150(5):948-960, Cell
—
id: 178123,
year: 2012,
vol: 150,
page: 948,
stat: Journal Article,
Asymmetrically modified nucleosomes
Voigt, Philipp; Leroy, Gary; Drury, William J 3rd; Zee, Barry M; Son, Jinsook; Beck, David B; Young, Nicolas L; Garcia, Benjamin A; Reinberg, Danny
2012 Sep;151(1):181-193, Cell
—
id: 179094,
year: 2012,
vol: 151,
page: 181,
stat: Journal Article,
Phylogenetic and transcriptomic analysis of chemosensory receptors in a pair of divergent ant species reveals sex-specific signatures of odor coding
Zhou, Xiaofan; Slone, Jesse D; Rokas, Antonis; Berger, Shelley L; Liebig, Jurgen; Ray, Anandasankar; Reinberg, Danny; Zwiebel, Laurence J
2012 Aug;8(8):e1002930-e1002930 e1002930, PLoS Genetics
—
id: 179315,
year: 2012,
vol: 8,
page: e1002930,
stat: Journal Article,
Chromatin higher-order structures and gene regulation
Li, Guohong; Reinberg, Danny
2011 Apr;21(2):175-186, Current opinion in genetics & development
—
id: 133353,
year: 2011,
vol: 21,
page: 175,
stat: Journal Article,
The Polycomb complex PRC2 and its mark in life
Margueron, Raphael; Reinberg, Danny
2011 Jan 20;469(7330):343-349, Nature
—
id: 121294,
year: 2011,
vol: 469,
page: 343,
stat: Journal Article,
The structure of NSD1 reveals an autoregulatory mechanism underlying histone H3K36 methylation
Qiao, Qi; Li, Yan; Chen, Zhi; Wang, Mingzhu; Reinberg, Danny; Xu, Rui-Ming
2011 Mar 11;286(10):8361-8368, Journal of biological chemistry
—
id: 138314,
year: 2011,
vol: 286,
page: 8361,
stat: Journal Article,
A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo
Rajakumara, Eerappa; Law, Julie A; Simanshu, Dhirendra K; Voigt, Philipp; Johnson, Lianna M; Reinberg, Danny; Patel, Dinshaw J; Jacobsen, Steven E
2011 Jan 15;25(2):137-152, Genes & development
—
id: 121295,
year: 2011,
vol: 25,
page: 137,
stat: Journal Article,
The C-terminal domain of RNA polymerase II is modified by site-specific methylation
Sims, Robert J 3rd; Rojas, Luis Alejandro; Beck, David; Bonasio, Roberto; Schuller, Roland; Drury, William J 3rd; Eick, Dirk; Reinberg, Danny
2011 Apr 1;332(6025):99-103, Science
—
id: 130305,
year: 2011,
vol: 332,
page: 99,
stat: Journal Article,
L3MBTL2 Protein Acts in Concert with PcG Protein-Mediated Monoubiquitination of H2A to Establish a Repressive Chromatin Structure
Trojer, Patrick; Cao, Alina R; Gao, Zhonghua; Li, Yan; Zhang, Jin; Xu, Xiaoqin; Li, Guohong; Losson, Regine; Erdjument-Bromage, Hediye; Tempst, Paul; Farnham, Peggy J; Reinberg, Danny
2011 May 20;42(4):438-450, Molecular cell
—
id: 132884,
year: 2011,
vol: 42,
page: 438,
stat: Journal Article,
BRD4 jump-starts transcription after mitotic silencing
Voigt P; Reinberg D
2011 Nov 29;12(11):133-133, Genome biology
—
id: 145774,
year: 2011,
vol: 12,
page: 133,
stat: Journal Article,
Histone Tails: Ideal Motifs for Probing Epigenetics through Chemical Biology Approaches
Voigt, Philipp; Reinberg, Danny
2011 Jan 24;12(2):236-252, Chembiochem : a European journal of chemical biology
—
id: 120654,
year: 2011,
vol: 12,
page: 236,
stat: Journal Article,
Epigenetic inheritance: uncontested?
Zhu, Bing; Reinberg, Danny
2011 Mar;21(3):435-441, Cell research
—
id: 134120,
year: 2011,
vol: 21,
page: 435,
stat: Journal Article,
MBT domain proteins in development and disease
Bonasio, Roberto; Lecona, Emilio; Reinberg, Danny
2010 Apr;21(2):221-230, Seminars in cell & developmental biology
—
id: 121299,
year: 2010,
vol: 21,
page: 221,
stat: Journal Article,
Molecular signals of epigenetic states
Bonasio, Roberto; Tu, Shengjiang; Reinberg, Danny
2010 Oct 29;330(6004):612-616, Science
—
id: 121296,
year: 2010,
vol: 330,
page: 612,
stat: Journal Article,
Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator
Bonasio, Roberto; Zhang, Guojie; Ye, Chaoyang; Mutti, Navdeep S; Fang, Xiaodong; Qin, Nan; Donahue, Greg; Yang, Pengcheng; Li, Qiye; Li, Cai; Zhang, Pei; Huang, Zhiyong; Berger, Shelley L; Reinberg, Danny; Wang, Jun; Liebig, Jurgen
2010 Aug 27;329(5995):1068-1071, Science
—
id: 112045,
year: 2010,
vol: 329,
page: 1068,
stat: Journal Article,
The program for processing newly synthesized histones H3.1 and H4
Campos, Eric I; Fillingham, Jeffrey; Li, Guohong; Zheng, Haiyan; Voigt, Philipp; Kuo, Wei-Hung W; Seepany, Harshika; Gao, Zhonghua; Day, Loren A; Greenblatt, Jack F; Reinberg, Danny
2010 Nov;17(11):1343-1351, Nature structural & molecular biology
—
id: 156197,
year: 2010,
vol: 17,
page: 1343,
stat: Journal Article,
New chaps in the histone chaperone arena
Campos, Eric I; Reinberg, Danny
2010 Jul 1;24(13):1334-1338, Genes & development
—
id: 110689,
year: 2010,
vol: 24,
page: 1334,
stat: Journal Article,
G9a and Glp methylate lysine 373 in the tumor suppressor p53
Huang, Jing; Dorsey, Jean; Chuikov, Sergei; Perez-Burgos, Laura; Zhang, Xinyue; Jenuwein, Thomas; Reinberg, Danny; Berger, Shelley L
2010 Mar 26;285(13):9636-9641, Journal of biological chemistry
—
id: 121298,
year: 2010,
vol: 285,
page: 9636,
stat: Journal Article,
Phosphorylation of the PRC2 component Ezh2 is cell cycle-regulated and up-regulates its binding to ncRNA
Kaneko, Syuzo; Li, Gang; Son, Jinsook; Xu, Chong-Feng; Margueron, Raphael; Neubert, Thomas A; Reinberg, Danny
2010 Dec 1;24(23):2615-2620, Genes & development
—
id: 114862,
year: 2010,
vol: 24,
page: 2615,
stat: Journal Article,
Jarid2 and PRC2, partners in regulating gene expression
Li, Gang; Margueron, Raphael; Ku, Manching; Chambon, Pierre; Bernstein, Bradley E; Reinberg, Danny
2010 Feb 15;24(4):368-380, Genes & development
—
id: 107274,
year: 2010,
vol: 24,
page: 368,
stat: Journal Article,
Highly compacted chromatin formed in vitro reflects the dynamics of transcription activation in vivo
Li, Guohong; Margueron, Raphael; Hu, Guobin; Stokes, David; Wang, Yuh-Hwa; Reinberg, Danny
2010 Apr 9;38(1):41-53, Molecular cell
—
id: 121297,
year: 2010,
vol: 38,
page: 41,
stat: Journal Article,
Chromatin structure and the inheritance of epigenetic information
Margueron, Raphael; Reinberg, Danny
2010 Apr;11(4):285-296, Nature reviews. Genetics
—
id: 108797,
year: 2010,
vol: 11,
page: 285,
stat: Journal Article,
Regulation of the Histone H4 Monomethylase PR-Set7 by CRL4(Cdt2)-Mediated PCNA-Dependent Degradation during DNA Damage
Oda, Hisanobu; Hubner, Michael R; Beck, David B; Vermeulen, Michiel; Hurwitz, Jerard; Spector, David L; Reinberg, Danny
2010 Nov 12;40(3):364-376, Molecular cell
—
id: 114509,
year: 2010,
vol: 40,
page: 364,
stat: Journal Article,
Histones: annotating chromatin
Campos, Eric I; Reinberg, Danny
2009 ;43:559-599, Annual review of genetics
—
id: 105363,
year: 2009,
vol: 43,
page: 559,
stat: Journal Article,
The target of the NSD family of histone lysine methyltransferases depends on the nature of the substrate
Li, Yan; Trojer, Patrick; Xu, Chong-Feng; Cheung, Peggie; Kuo, Alex; Drury, William J 3rd; Qiao, Qi; Neubert, Thomas A; Xu, Rui-Ming; Gozani, Or; Reinberg, Danny
2009 Dec 4;284(49):34283-34295, Journal of biological chemistry
—
id: 105498,
year: 2009,
vol: 284,
page: 34283,
stat: Journal Article,
Role of the polycomb protein EED in the propagation of repressive histone marks
Margueron, Raphael; Justin, Neil; Ohno, Katsuhito; Sharpe, Miriam L; Son, Jinsook; Drury, William J 3rd; Voigt, Philipp; Martin, Stephen R; Taylor, William R; De Marco, Valeria; Pirrotta, Vincenzo; Reinberg, Danny; Gamblin, Steven J
2009 Oct 8;461(7265):762-767, Nature
—
id: 103154,
year: 2009,
vol: 461,
page: 762,
stat: Journal Article,
Monomethylation of Histone H4-Lysine 20 is involved in Chromosome Structure and Stability and is essential for Mouse Development
Oda, Hisanobu; Okamoto, Ikuhiro; Murphy, Niall; Chu, Jianhua; Price, Sandy M; Shen, Michael M; Torres-Padilla, Maria Elena; Heard, Edith; Reinberg, Danny
2009 Apr;29(8):2278-2295, Molecular & cellular biology
—
id: 94406,
year: 2009,
vol: 29,
page: 2278,
stat: Journal Article,
Processing the H3K36me3 signature
Sims, Robert J 3rd; Reinberg, Danny
2009 Mar;41(3):270-271, Nature genetics
—
id: 94405,
year: 2009,
vol: 41,
page: 270,
stat: Journal Article,
Stem cells: Escaping fates with open states
Sims, Robert J 3rd; Reinberg, Danny
2009 Aug 13;460(7257):802-803, Nature
—
id: 121300,
year: 2009,
vol: 460,
page: 802,
stat: Journal Article,
Dynamic histone H1 isotype 4 methylation and demethylation by histone lysine methyltransferase G9A/KMT1C and the jumonji domain containing JMJD2/KDM4 proteins
Trojer, Patrick; Zhang, Jin; Yonezawa, Masato; Schmidt, Andreas; Zheng, Haiyan; Jenuwein, Thomas; Reinberg, Danny
2009 Mar 27;284(13):8395-8405, Journal of biological chemistry
—
id: 94407,
year: 2009,
vol: 284,
page: 8395,
stat: Journal Article,
Calorie restriction and the exercise of chromatin
Vaquero, Alejandro; Reinberg, Danny
2009 Aug 15;23(16):1849-1869, Genes & development
—
id: 121301,
year: 2009,
vol: 23,
page: 1849,
stat: Journal Article,
Heterogeneous nuclear ribonucleoprotein L Is a subunit of human KMT3a/Set2 complex required for H3 Lys-36 trimethylation activity in vivo
Yuan, Wen; Xie, Jingwei; Long, Chengzu; Erdjument-Bromage, Hediye; Ding, Xiaojun; Zheng, Yong; Tempst, Paul; Chen, She; Zhu, Bing; Reinberg, Danny
2009 Jun 5;284(23):15701-15707, Journal of biological chemistry
—
id: 121302,
year: 2009,
vol: 284,
page: 15701,
stat: Journal Article,
Nonradioactive, ultrasensitive site-specific protein-protein photocrosslinking: interactions of alpha-helix 2 of TATA-binding protein with general transcription factor TFIIA and transcriptional repressor NC2
Kim, Younggyu; Ebright, Yon W; Goodman, Adam R; Reinberg, Danny; Ebright, Richard H
2008 Nov;36(19):6143-6154, Nucleic acids research
—
id: 94408,
year: 2008,
vol: 36,
page: 6143,
stat: Journal Article,
Ezh1 and Ezh2 maintain repressive chromatin through different mechanisms
Margueron, Raphael; Li, Guohong; Sarma, Kavitha; Blais, Alexandre; Zavadil, Jiri; Woodcock, Christopher L; Dynlacht, Brian D; Reinberg, Danny
2008 Nov 21;32(4):503-518, Molecular cell
—
id: 91489,
year: 2008,
vol: 32,
page: 503,
stat: Journal Article,
Ezh2 requires PHF1 to efficiently catalyze H3 lysine 27 trimethylation in vivo
Sarma, Kavitha; Margueron, Raphael; Ivanov, Alexey; Pirrotta, Vincenzo; Reinberg, Danny
2008 Apr;28(8):2718-2731, Molecular & cellular biology
—
id: 78359,
year: 2008,
vol: 28,
page: 2718,
stat: Journal Article,
Is there a code embedded in proteins that is based on post-translational modifications?
Sims, Robert J 3rd; Reinberg, Danny
2008 Oct;9(10):815-820, Nature reviews. Molecular cell biology
—
id: 94409,
year: 2008,
vol: 9,
page: 815,
stat: Journal Article,
A gateway to study protein lysine methylation
Trojer, Patrick; Reinberg, Danny
2008 Jun;4(6):332-334, Nature Chemical Biology
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id: 94410,
year: 2008,
vol: 4,
page: 332,
stat: Journal Article,
Beyond histone methyl-lysine binding: how malignant brain tumor (MBT) protein L3MBTL1 impacts chromatin structure
Trojer, Patrick; Reinberg, Danny
2008 Mar;7(5):578-585, Cell cycle
—
id: 78357,
year: 2008,
vol: 7,
page: 578,
stat: Journal Article,
New nomenclature for chromatin-modifying enzymes
Allis, C David; Berger, Shelley L; Cote, Jacques; Dent, Sharon; Jenuwien, Thomas; Kouzarides, Tony; Pillus, Lorraine; Reinberg, Danny; Shi, Yang; Shiekhattar, Ramin; Shilatifard, Ali; Workman, Jerry; Zhang, Yi
2007 Nov 16;131(4):633-636, Cell
—
id: 94411,
year: 2007,
vol: 131,
page: 633,
stat: Journal Article,
Methylation-acetylation interplay activates p53 in response to DNA damage
Ivanov, Gleb S; Ivanova, Tatyana; Kurash, Julia; Ivanov, Alexey; Chuikov, Sergey; Gizatullin, Farid; Herrera-Medina, Enrique M; Rauscher, Frank 3rd; Reinberg, Danny; Barlev, Nickolai A
2007 Oct;27(19):6756-6769, Molecular & cellular biology
—
id: 94414,
year: 2007,
vol: 27,
page: 6756,
stat: Journal Article,
Demethylation of H3K27 regulates polycomb recruitment and H2A ubiquitination
Lee, Min Gyu; Villa, Raffaella; Trojer, Patrick; Norman, Jessica; Yan, Kai-Ping; Reinberg, Danny; Di Croce, Luciano; Shiekhattar, Ramin
2007 Oct 19;318(5849):447-450, Science
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id: 94413,
year: 2007,
vol: 318,
page: 447,
stat: Journal Article,
SirT3 is a nuclear NAD+-dependent histone deacetylase that translocates to the mitochondria upon cellular stress
Scher, Michael B; Vaquero, Alejandro; Reinberg, Danny
2007 Apr 15;21(8):920-928, Genes & development
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id: 72041,
year: 2007,
vol: 21,
page: 920,
stat: Journal Article,
Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing
Sims, Robert J 3rd; Millhouse, Scott; Chen, Chi-Fu; Lewis, Brian A; Erdjument-Bromage, Hediye; Tempst, Paul; Manley, James L; Reinberg, Danny
2007 Nov 30;28(4):665-676, Molecular cell
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id: 75673,
year: 2007,
vol: 28,
page: 665,
stat: Journal Article,
L3MBTL1, a histone-methylation-dependent chromatin lock
Trojer, Patrick; Li, Guohong; Sims, Robert J 3rd; Vaquero, Alejandro; Kalakonda, Nagesh; Boccuni, Piernicola; Lee, Donghoon; Erdjument-Bromage, Hediye; Tempst, Paul; Nimer, Stephen D; Wang, Yuh-Hwa; Reinberg, Danny
2007 Jun 1;129(5):915-928, Cell
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id: 94415,
year: 2007,
vol: 129,
page: 915,
stat: Journal Article,
Facultative heterochromatin: is there a distinctive molecular signature?
Trojer, Patrick; Reinberg, Danny
2007 Oct 12;28(1):1-13, Molecular cell
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id: 75844,
year: 2007,
vol: 28,
page: 1,
stat: Journal Article,
NAD+-dependent deacetylation of H4 lysine 16 by class III HDACs
Vaquero, A; Sternglanz, R; Reinberg, D
2007 Aug 13;26(37):5505-5520, Oncogene
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id: 73924,
year: 2007,
vol: 26,
page: 5505,
stat: Journal Article,
SIRT1 regulates the histone methyl-transferase SUV39H1 during heterochromatin formation
Vaquero, Alejandro; Scher, Michael; Erdjument-Bromage, Hediye; Tempst, Paul; Serrano, Lourdes; Reinberg, Danny
2007 Nov 15;450(7168):440-444, Nature
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id: 94412,
year: 2007,
vol: 450,
page: 440,
stat: Journal Article,
Drosophila Paf1 modulates chromatin structure at actively transcribed genes
Adelman, Karen; Wei, Wenxiang; Ardehali, M Behfar; Werner, Janis; Zhu, Bing; Reinberg, Danny; Lis, John T
2006 Jan;26(1):250-260, Molecular & cellular biology
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id: 69848,
year: 2006,
vol: 26,
page: 250,
stat: Journal Article,
Promoter activation when the ChIPs are down
Lewis, Brian A; Reinberg, Danny
2006 Feb;13(2):96-97, Nature structural & molecular biology
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id: 68410,
year: 2006,
vol: 13,
page: 96,
stat: Journal Article,
Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II
Pavri, Rushad; Zhu, Bing; Li, Guohong; Trojer, Patrick; Mandal, Subhrangsu; Shilatifard, Ali; Reinberg, Danny
2006 May 19;125(4):703-717, Cell
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id: 69845,
year: 2006,
vol: 125,
page: 703,
stat: Journal Article,
de FACTo nucleosome dynamics
Reinberg, Danny; Sims, Robert J 3rd
2006 Aug 18;281(33):23297-23301, Journal of biological chemistry
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id: 69843,
year: 2006,
vol: 281,
page: 23297,
stat: Journal Article,
Histone H3 Lys 4 methylation: caught in a bind?
Sims, Robert J 3rd; Reinberg, Danny
2006 Oct 15;20(20):2779-2786, Genes & development
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id: 69842,
year: 2006,
vol: 20,
page: 2779,
stat: Journal Article,
Methods to identify and functionally analyze factors that specifically recognize histone lysine methylation
Sims, Robert J 3rd; Trojer, Patrick; Li, Guohong; Reinberg, Danny
2006 Dec;40(4):331-338, Methods
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id: 69841,
year: 2006,
vol: 40,
page: 331,
stat: Journal Article,
Suz12 binds to silenced regions of the genome in a cell-type-specific manner
Squazzo, Sharon L; O'Geen, Henriette; Komashko, Vitalina M; Krig, Sheryl R; Jin, Victor X; Jang, Sung-wook; Margueron, Raphael; Reinberg, Danny; Green, Roland; Farnham, Peggy J
2006 Jul;16(7):890-900, Genome research
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id: 69844,
year: 2006,
vol: 16,
page: 890,
stat: Journal Article,
Histone lysine demethylases and their impact on epigenetics
Trojer, Patrick; Reinberg, Danny
2006 Apr 21;125(2):213-217, Cell
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id: 69847,
year: 2006,
vol: 125,
page: 213,
stat: Journal Article,
SirT2 is a histone deacetylase with preference for histone H4 Lys 16 during mitosis
Vaquero, Alejandro; Scher, Michael B; Lee, Dong Hoon; Sutton, Ann; Cheng, Hwei-Ling; Alt, Frederick W; Serrano, Lourdes; Sternglanz, Rolf; Reinberg, Danny
2006 May 15;20(10):1256-1261, Genes & development
—
id: 69846,
year: 2006,
vol: 20,
page: 1256,
stat: Journal Article,
PR-Set7-dependent methylation of histone H4 Lys 20 functions in repression of gene expression and is essential for mitosis
Karachentsev, Dmitry; Sarma, Kavitha; Reinberg, Danny; Steward, Ruth
2005 Feb 15;19(4):431-435, Genes & development
—
id: 69857,
year: 2005,
vol: 19,
page: 431,
stat: Journal Article,
Composition and histone substrates of polycomb repressive group complexes change during cellular differentiation
Kuzmichev, Andrei; Margueron, Raphael; Vaquero, Alejandro; Preissner, Tanja S; Scher, Michael; Kirmizis, Antonis; Ouyang, Xuesong; Brockdorff, Neil; Abate-Shen, Cory; Farnham, Peggy; Reinberg, Danny
2005 Feb 8;102(6):1859-1864, Proceedings of the National Academy of Sciences of the United States of America
—
id: 69856,
year: 2005,
vol: 102,
page: 1859,
stat: Journal Article,
Functional characterization of core promoter elements: the downstream core element is recognized by TAF1
Lee, Dong-Hoon; Gershenzon, Naum; Gupta, Malavika; Ioshikhes, Ilya P; Reinberg, Danny; Lewis, Brian A
2005 Nov;25(21):9674-9686, Molecular & cellular biology
—
id: 68411,
year: 2005,
vol: 25,
page: 9674,
stat: Journal Article,
Functional characterization of core promoter elements: DPE-specific transcription requires the protein kinase CK2 and the PC4 coactivator
Lewis, Brian A; Sims, Robert J 3rd; Lane, William S; Reinberg, Danny
2005 May 13;18(4):471-481, Molecular cell
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id: 68412,
year: 2005,
vol: 18,
page: 471,
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Margueron, Raphael; Trojer, Patrick; Reinberg, Danny
2005 Apr;15(2):163-176, Current opinion in genetics & development
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PARP-1 determines specificity in a retinoid signaling pathway via direct modulation of mediator
Pavri, Rushad; Lewis, Brian; Kim, Tae-Kyung; Dilworth, F Jeffrey; Erdjument-Bromage, Hediye; Tempst, Paul; de Murcia, Gilbert; Evans, Ronald; Chambon, Pierre; Reinberg, Danny
2005 Apr 1;18(1):83-96, Molecular cell
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Sarma, Kavitha; Reinberg, Danny
2005 Feb;6(2):139-149, Nature reviews. Molecular cell biology
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Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains
Sims, Robert J 3rd; Chen, Chi-Fu; Santos-Rosa, Helena; Kouzarides, Tony; Patel, Smita S; Reinberg, Danny
2005 Dec 23;280(51):41789-41792, Journal of biological chemistry
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Polycomb group protein ezh2 controls actin polymerization and cell signaling
Su, I-hsin; Dobenecker, Marc-Werner; Dickinson, Ephraim; Oser, Matthew; Basavaraj, Ashwin; Marqueron, Raphael; Viale, Agnes; Reinberg, Danny; Wulfing, Christoph; Tarakhovsky, Alexander
2005 May 6;121(3):425-436, Cell
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Xiao, Bing; Jing, Chun; Kelly, Geoff; Walker, Philip A; Muskett, Frederick W; Frenkiel, Thomas A; Martin, Stephen R; Sarma, Kavitha; Reinberg, Danny; Gamblin, Steven J; Wilson, Jonathan R
2005 Jun 15;19(12):1444-1454, Genes & development
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Zhu, Bing; Mandal, Subhrangsu S; Pham, Anh-Dung; Zheng, Yong; Erdjument-Bromage, Hediye; Batra, Surinder K; Tempst, Paul; Reinberg, Danny
2005 Jul 15;19(14):1668-1673, Genes & development
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Zhu, Bing; Zheng, Yong; Pham, Anh-Dung; Mandal, Subhrangsu S; Erdjument-Bromage, Hediye; Tempst, Paul; Reinberg, Danny
2005 Nov 23;20(4):601-611, Molecular cell
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Belotserkovskaya, Rimma; Reinberg, Danny
2004 Apr;14(2):139-146, Current opinion in genetics & development
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Belotserkovskaya, Rimma; Saunders, Abbie; Lis, John T; Reinberg, Danny
2004 Mar 15;1677(1-3):87-99, Biochimica & biophysica acta
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Bourbon, Henri-Marc; Aguilera, Andres; Ansari, Aseem Z; Asturias, Francisco J; Berk, Arnold J; Bjorklund, Stefan; Blackwell, T Keith; Borggrefe, Tilman; Carey, Michael; Carlson, Marian; Conaway, Joan W; Conaway, Ronald C; Emmons, Scott W; Fondell, Joseph D; Freedman, Leonard P; Fukasawa, Toshio; Gustafsson, Claes M; Han, Min; He, Xi; Herman, Paul K; Hinnebusch, Alan G; Holmberg, Steen; Holstege, Frank C; Jaehning, Judith A; Kim, Young-Joon; Kuras, Laurent; Leutz, Achim; Lis, John T; Meisterernest, Michael; Naar, Anders M; Nasmyth, Kim; Parvin, Jeffrey D; Ptashne, Mark; Reinberg, Danny; Ronne, Hans; Sadowski, Ivan; Sakurai, Hiroshi; Sipiczki, Matthias; Sternberg, Paul W; Stillman, David J; Strich, Randy; Struhl, Kevin; Svejstrup, Jasper Q; Tuck, Simon; Winston, Fred; Roeder, Robert G; Kornberg, Roger D
2004 Jun 4;14(5):553-557, Molecular cell
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Chuikov, Sergei; Kurash, Julia K; Wilson, Jonathan R; Xiao, Bing; Justin, Neil; Ivanov, Gleb S; McKinney, Kristine; Tempst, Paul; Prives, Carol; Gamblin, Steven J; Barlev, Nickolai A; Reinberg, Danny
2004 Nov 18;432(7015):353-360, Nature
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Human Spt6 stimulates transcription elongation by RNA polymerase II in vitro
Endoh, Masaki; Zhu, Wenyan; Hasegawa, Jun; Watanabe, Hajime; Kim, Dong-Ki; Aida, Masatoshi; Inukai, Naoto; Narita, Takashi; Yamada, Tomoko; Furuya, Akiko; Sato, Hiroe; Yamaguchi, Yuki; Mandal, Subhrangsu S; Reinberg, Danny; Wada, Tadashi; Handa, Hiroshi
2004 Apr;24(8):3324-3336, Molecular & cellular biology
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Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27
Kirmizis, Antonis; Bartley, Stephanie M; Kuzmichev, Andrei; Margueron, Raphael; Reinberg, Danny; Green, Roland; Farnham, Peggy J
2004 Jul 1;18(13):1592-1605, Genes & development
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Different EZH2-containing complexes target methylation of histone H1 or nucleosomal histone H3
Kuzmichev, Andrei; Jenuwein, Thomas; Tempst, Paul; Reinberg, Danny
2004 Apr 23;14(2):183-193, Molecular cell
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Techniques used to study transcription on chromatin templates
Loyola, Alejandra; He, Shu; Oh, Santaek; McCafferty, Dewey G; Reinberg, Danny
2004 ;377:474-499, Methods in enzymology
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Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II
Mandal, Subhrangsu S; Chu, Chun; Wada, Tadashi; Handa, Hiroshi; Shatkin, Aaron J; Reinberg, Danny
2004 May 18;101(20):7572-7577, Proceedings of the National Academy of Sciences of the United States of America
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Epigenetic dynamics of imprinted X inactivation during early mouse development
Okamoto, Ikuhiro; Otte, Arie P; Allis, C David; Reinberg, Danny; Heard, Edith
2004 Jan 30;303(5658):644-649, Science
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Steps toward understanding the inheritance of repressive methyl-lysine marks in histones
Reinberg, D; Chuikov, S; Farnham, P; Karachentsev, D; Kirmizis, A; Kuzmichev, A; Margueron, R; Nishioka, K; Preissner, T S; Sarma, K; Abate-Shen, C; Steward, R; Vaquero, A
2004 ;69:171-182, Cold Spring Harbor symposia on quantitative biology
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Differential histone H3 Lys-9 and Lys-27 methylation profiles on the X chromosome
Rougeulle, Claire; Chaumeil, Julie; Sarma, Kavitha; Allis, C David; Reinberg, Danny; Avner, Philip; Heard, Edith
2004 Jun;24(12):5475-5484, Molecular & cellular biology
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Tips in analyzing antibodies directed against specific histone tail modifications
Sarma, Kavitha; Nishioka, Kenichi; Reinberg, Danny
2004 ;376:255-269, Methods in enzymology
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A silencing pathway to induce H3-K9 and H4-K20 trimethylation at constitutive heterochromatin
Schotta, Gunnar; Lachner, Monika; Sarma, Kavitha; Ebert, Anja; Sengupta, Roopsha; Reuter, Gunter; Reinberg, Danny; Jenuwein, Thomas
2004 Jun 1;18(11):1251-1262, Genes & development
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Sims, Robert J 3rd; Belotserkovskaya, Rimma; Reinberg, Danny
2004 Oct 15;18(20):2437-2468, Genes & development
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Recent highlights of RNA-polymerase-II-mediated transcription
Sims, Robert J 3rd; Mandal, Subhrangsu S; Reinberg, Danny
2004 Jun;16(3):263-271, Current opinion in cell biology
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From chromatin to cancer: a new histone lysine methyltransferase enters the mix
Sims, Robert J 3rd; Reinberg, Danny
2004 Aug;6(8):685-687, Nature cell biology
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Human SirT1 interacts with histone H1 and promotes formation of facultative heterochromatin
Vaquero, Alejandro; Scher, Michael; Lee, Donghoon; Erdjument-Bromage, Hediye; Tempst, Paul; Reinberg, Danny
2004 Oct 8;16(1):93-105, Molecular cell
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FACT facilitates transcription-dependent nucleosome alteration
Belotserkovskaya, Rimma; Oh, Sangtaek; Bondarenko, Vladimir A; Orphanides, George; Studitsky, Vasily M; Reinberg, Danny
2003 Aug 22;301(5636):1090-1093, Science
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The C-terminal domain phosphatase and transcription elongation activities of FCP1 are regulated by phosphorylation
Friedl, Erika M; Lane, William S; Erdjument-Bromage, Hediye; Tempst, Paul; Reinberg, Danny
2003 Mar 4;100(5):2328-2333, Proceedings of the National Academy of Sciences of the United States of America
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Tails of intrigue: phosphorylation of RNA polymerase II mediates histone methylation
Hampsey, Michael; Reinberg, Danny
2003 May 16;113(4):429-432, Cell
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Facile synthesis of site-specifically acetylated and methylated histone proteins: reagents for evaluation of the histone code hypothesis
He, Shu; Bauman, David; Davis, Jamaine S; Loyola, Alejandra; Nishioka, Kenichi; Gronlund, Jennifer L; Reinberg, Danny; Meng, Fanyu; Kelleher, Neil; McCafferty, Dewey G
2003 Oct 14;100(21):12033-12038, Proceedings of the National Academy of Sciences of the United States of America
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The mediator coactivator complex: functional and physical roles in transcriptional regulation
Lewis, Brian A; Reinberg, Danny
2003 Sep 15;116(Pt 18):3667-3675, Journal of cell science
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Functional analysis of the subunits of the chromatin assembly factor RSF
Loyola, Alejandra; Huang, Jing-Yi; LeRoy, Gary; Hu, Sherrie; Wang, Yuh-Hwa; Donnelly, Robert J; Lane, William S; Lee, Sheng-Chung; Reinberg, Danny
2003 Oct;23(19):6759-6768, Molecular & cellular biology
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Loyola, Alejandra; Reinberg, Danny
2003 Sep;31(1):96-103, Methods
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Methods and tips for the purification of human histone methyltransferases
Nishioka, Kenichi; Reinberg, Danny
2003 Sep;31(1):49-58, Methods
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Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo
Saunders, Abbie; Werner, Janis; Andrulis, Erik D; Nakayama, Takahiro; Hirose, Susumu; Reinberg, Danny; Lis, John T
2003 Aug 22;301(5636):1094-1096, Science
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ASAP, a novel protein complex involved in RNA processing and apoptosis
Schwerk, Christian; Prasad, Jayendra; Degenhardt, Kurt; Erdjument-Bromage, Hediye; White, Eileen; Tempst, Paul; Kidd, Vincent J; Manley, James L; Lahti, Jill M; Reinberg, Danny
2003 Apr;23(8):2981-2990, Molecular & cellular biology
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Histone lysine methylation: a signature for chromatin function
Sims, Robert J 3rd; Nishioka, Kenichi; Reinberg, Danny
2003 Nov;19(11):629-639, Trends in genetics
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The constantly changing face of chromatin
Vaquero, Alejandro; Loyola, Alejandra; Reinberg, Danny
2003 Apr 9;2003(14):RE4-RE4, Science of aging knowledge environment
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Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1
Iratni, Rabah; Yan, Yu-Ting; Chen, Canhe; Ding, Jixiang; Zhang, Yi; Price, Sandy M; Reinberg, Danny; Shen, Michael M
2002 Dec 6;298(5600):1996-1999, Science
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Human Elongator facilitates RNA polymerase II transcription through chromatin
Kim, Jae-Hyun; Lane, William S; Reinberg, Danny
2002 Feb 5;99(3):1241-1246, Proceedings of the National Academy of Sciences of the United States of America
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Role of the Sin3-histone deacetylase complex in growth regulation by the candidate tumor suppressor p33(ING1)
Kuzmichev, A; Zhang, Y; Erdjument-Bromage, H; Tempst, P; Reinberg, D
2002 Feb;22(3):835-848, Molecular & cellular biology
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Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein
Kuzmichev, Andrei; Nishioka, Kenichi; Erdjument-Bromage, Hediye; Tempst, Paul; Reinberg, Danny
2002 Nov 15;16(22):2893-2905, Genes & development
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FCP1, a phosphatase specific for the heptapeptide repeat of the largest subunit of RNA polymerase II, stimulates transcription elongation
Mandal, Subhrangsu S; Cho, Helen; Kim, Sungjoon; Cabane, Kettly; Reinberg, Danny
2002 Nov;22(21):7543-7552, Molecular & cellular biology
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Set9, a novel histone H3 methyltransferase that facilitates transcription by precluding histone tail modifications required for heterochromatin formation
Nishioka, Kenichi; Chuikov, Sergei; Sarma, Kavitha; Erdjument-Bromage, Hediye; Allis, C David; Tempst, Paul; Reinberg, Danny
2002 Feb 15;16(4):479-489, Genes & development
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PR-Set7 is a nucleosome-specific methyltransferase that modifies lysine 20 of histone H4 and is associated with silent chromatin
Nishioka, Kenichi; Rice, Judd C; Sarma, Kavitha; Erdjument-Bromage, Hediye; Werner, Janis; Wang, Yanming; Chuikov, Sergei; Valenzuela, Pablo; Tempst, Paul; Steward, Ruth; Lis, John T; Allis, C David; Reinberg, Danny
2002 Jun;9(6):1201-1213, Molecular cell
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A unified theory of gene expression
Orphanides, George; Reinberg, Danny
2002 Feb 22;108(4):439-451, Cell
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Mitotic-specific methylation of histone H4 Lys 20 follows increased PR-Set7 expression and its localization to mitotic chromosomes
Rice, Judd C; Nishioka, Kenichi; Sarma, Kavitha; Steward, Ruth; Reinberg, Danny; Allis, C David
2002 Sep 1;16(17):2225-2230, Genes & development
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Role of histone deacetylase complexes in the regulation of chromatin metabolism
Kuzmichev, A; Reinberg, D
2001 ;254:35-58, Current topics in microbiology & immunology
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RBP1 recruits the mSIN3-histone deacetylase complex to the pocket of retinoblastoma tumor suppressor family proteins found in limited discrete regions of the nucleus at growth arrest
Lai, A; Kennedy, B K; Barbie, D A; Bertos, N R; Yang, X J; Theberge, M C; Tsai, S C; Seto, E; Zhang, Y; Kuzmichev, A; Lane, W S; Reinberg, D; Harlow, E; Branton, P E
2001 Apr;21(8):2918-2932, Molecular & cellular biology
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Defective interplay of activators and repressors with TFIH in xeroderma pigmentosum
Liu, J; Akoulitchev, S; Weber, A; Ge, H; Chuikov, S; Libutti, D; Wang, X W; Conaway, J W; Harris, C C; Conaway, R C; Reinberg, D; Levens, D
2001 Feb 9;104(3):353-363, Cell
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Reconstitution of recombinant chromatin establishes a requirement for histone-tail modifications during chromatin assembly and transcription
Loyola, A; LeRoy, G; Wang, Y H; Reinberg, D
2001 Nov 1;15(21):2837-2851, Genes & development
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Transcription. Switching partners in a regulatory tango
Nishioka, K; Reinberg, D
2001 Dec 21;294(5551):2497-2498, Science
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Interaction of FACT, SSRP1, and the high mobility group (HMG) domain of SSRP1 with DNA damaged by the anticancer drug cisplatin
Yarnell, A T; Oh, S; Reinberg, D; Lippard, S J
2001 Jul 13;276(28):25736-25741, Journal of biological chemistry
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Transcription regulation by histone methylation: interplay between different covalent modifications of the core histone tails
Zhang, Y; Reinberg, D
2001 Sep 15;15(18):2343-2360, Genes & development
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TFIIH is negatively regulated by cdk8-containing mediator complexes
Akoulitchev, S; Chuikov, S; Reinberg, D
2000 Sep 7;407(6800):102-106, Nature
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Genetic analysis of the YDR1-BUR6 repressor complex reveals an intricate balance among transcriptional regulatory proteins in yeast
Kim, S; Cabane, K; Hampsey, M; Reinberg, D
2000 Apr;20(7):2455-2465, Molecular & cellular biology
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Mechanism of ATP-dependent promoter melting by transcription factor IIH
Kim, T K; Ebright, R H; Reinberg, D
2000 May 26;288(5470):1418-1422, Science
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Purification and characterization of a human factor that assembles and remodels chromatin
LeRoy, G; Loyola, A; Lane, W S; Reinberg, D
2000 May 19;275(20):14787-14790, Journal of biological chemistry
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RNA polymerase II elongation through chromatin
Orphanides, G; Reinberg, D
2000 Sep 28;407(6803):471-475, Nature
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FACT relieves DSIF/NELF-mediated inhibition of transcriptional elongation and reveals functional differences between P-TEFb and TFIIH
Wada, T; Orphanides, G; Hasegawa, J; Kim, D K; Shima, D; Yamaguchi, Y; Fukuda, A; Hisatake, K; Oh, S; Reinberg, D; Handa, H
2000 Jun;5(6):1067-1072, Molecular cell
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A protein phosphatase functions to recycle RNA polymerase II
Cho, H; Kim, T K; Mancebo, H; Lane, W S; Flores, O; Reinberg, D
1999 Jun 15;13(12):1540-1552, Genes & development
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RNA polymerase II as a control panel for multiple coactivator complexes
Hampsey, M; Reinberg, D
1999 Apr;9(2):132-139, Current opinion in genetics & development
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The general transcription factors IIA, IIB, IIF, and IIE are required for RNA polymerase II transcription from the human U1 small nuclear RNA promoter
Kuhlman, T C; Cho, H; Reinberg, D; Hernandez, N
1999 Mar;19(3):2130-2141, Molecular & cellular biology
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Repression: targeting the heart of the matter
Maldonado, E; Hampsey, M; Reinberg, D
1999 Nov 24;99(5):455-458, Cell
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MBD2 is a transcriptional repressor belonging to the MeCP1 histone deacetylase complex
Ng, H H; Zhang, Y; Hendrich, B; Johnson, C A; Turner, B M; Erdjument-Bromage, H; Tempst, P; Reinberg, D; Bird, A
1999 Sep;23(1):58-61, Nature genetics
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The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins
Orphanides, G; Wu, W H; Lane, W S; Hampsey, M; Reinberg, D
1999 Jul 15;400(6741):284-288, Nature
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Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation
Zhang, Y; Ng, H H; Erdjument-Bromage, H; Tempst, P; Bird, A; Reinberg, D
1999 Aug 1;13(15):1924-1935, Genes & development
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The molecular mechanism of mitotic inhibition of TFIIH is mediated by phosphorylation of CDK7
Akoulitchev, S; Reinberg, D
1998 Nov 15;12(22):3541-3550, Genes & development
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A human RNA polymerase II complex containing factors that modify chromatin structure
Cho, H; Orphanides, G; Sun, X; Yang, X J; Ogryzko, V; Lees, E; Nakatani, Y; Reinberg, D
1998 Sep;18(9):5355-5363, Molecular & cellular biology
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Human general transcription factor TFIIB: conformational variability and interaction with VP16 activation domain
Hayashi, F; Ishima, R; Liu, D; Tong, K I; Kim, S; Reinberg, D; Bagby, S; Ikura, M
1998 Jun 2;37(22):7941-7951, Biochemistry
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Promoter-proximal stalling results from the inability to recruit transcription factor IIH to the transcription complex and is a regulated event
Kumar, K P; Akoulitchev, S; Reinberg, D
1998 Aug 18;95(17):9767-9772, Proceedings of the National Academy of Sciences of the United States of America
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New core promoter element in RNA polymerase II-dependent transcription: sequence-specific DNA binding by transcription factor IIB
Lagrange, T; Kapanidis, A N; Tang, H; Reinberg, D; Ebright, R H
1998 Jan 1;12(1):34-44, Genes & development
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Immunoaffinity purification of the human multisubunit transcription factor IIH
LeRoy, G; Drapkin, R; Weis, L; Reinberg, D
1998 Mar 20;273(12):7134-7140, Journal of biological chemistry
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Requirement of RSF and FACT for transcription of chromatin templates in vitro
LeRoy, G; Orphanides, G; Lane, W S; Reinberg, D
1998 Dec 4;282(5395):1900-1904, Science
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The mammalian transcriptional repressor RBP (CBF1) targets TFIID and TFIIA to prevent activated transcription
Olave, I; Reinberg, D; Vales, L D
1998 Jun 1;12(11):1621-1637, Genes & development
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FACT, a factor that facilitates transcript elongation through nucleosomes
Orphanides, G; LeRoy, G; Chang, C H; Luse, D S; Reinberg, D
1998 Jan 9;92(1):105-116, Cell
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The RNA polymerase II general transcription factors: past, present, and future
Reinberg, D; Orphanides, G; Ebright, R; Akoulitchev, S; Carcamo, J; Cho, H; Cortes, P; Drapkin, R; Flores, O; Ha, I; Inostroza, J A; Kim, S; Kim, T K; Kumar, P; Lagrange, T; LeRoy, G; Lu, H; Ma, D M; Maldonado, E; Merino, A; Mermelstein, F; Olave, I; Sheldon, M; Shiekhattar, R; Zawel, L
1998 ;63:83-103, Cold Spring Harbor symposia on quantitative biology
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NAT, a human complex containing Srb polypeptides that functions as a negative regulator of activated transcription
Sun, X; Zhang, Y; Cho, H; Rickert, P; Lees, E; Lane, W; Reinberg, D
1998 Aug;2(2):213-222, Molecular cell
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The dermatomyositis-specific autoantigen Mi2 is a component of a complex containing histone deacetylase and nucleosome remodeling activities
Zhang, Y; LeRoy, G; Seelig, H P; Lane, W S; Reinberg, D
1998 Oct 16;95(2):279-289, Cell
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year: 1998,
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SAP30, a novel protein conserved between human and yeast, is a component of a histone deacetylase complex
Zhang, Y; Sun, Z W; Iratni, R; Erdjument-Bromage, H; Tempst, P; Hampsey, M; Reinberg, D
1998 Jun;1(7):1021-1031, Molecular cell
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Affinity purification of a human RNA polymerase II complex using monoclonal antibodies against transcription factor IIF
Cho, H; Maldonado, E; Reinberg, D
1997 Apr 25;272(17):11495-11502, Journal of biological chemistry
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The human immunodeficiency virus transactivator Tat interacts with the RNA polymerase II holoenzyme
Cujec, T P; Cho, H; Maldonado, E; Meyer, J; Reinberg, D; Peterlin, B M
1997 Apr;17(4):1817-1823, Molecular & cellular biology
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Transcription: why are TAFs essential?
Hampsey, M; Reinberg, D
1997 Jan 1;7(1):R44-R46, Current biology. CB
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The Dr1/DRAP1 heterodimer is a global repressor of transcription in vivo
Kim, S; Na, J G; Hampsey, M; Reinberg, D
1997 Feb 4;94(3):820-825, Proceedings of the National Academy of Sciences of the United States of America
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Trajectory of DNA in the RNA polymerase II transcription preinitiation complex
Kim, T K; Lagrange, T; Wang, Y H; Griffith, J D; Reinberg, D; Ebright, R H
1997 Nov 11;94(23):12268-12273, Proceedings of the National Academy of Sciences of the United States of America
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year: 1997,
vol: 94,
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RNA polymerase II stalled at a thymine dimer: footprint and effect on excision repair
Selby, C P; Drapkin, R; Reinberg, D; Sancar, A
1997 Feb 15;25(4):787-793, Nucleic acids research
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vol: 25,
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Accurate positioning of RNA polymerase II on a natural TATA-less promoter is independent of TATA-binding-protein-associated factors and initiator-binding proteins
Weis, L; Reinberg, D
1997 Jun;17(6):2973-2984, Molecular & cellular biology
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year: 1997,
vol: 17,
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Functional dissection of a human Dr1-DRAP1 repressor complex
Yeung, K; Kim, S; Reinberg, D
1997 Jan;17(1):36-45, Molecular & cellular biology
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year: 1997,
vol: 17,
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Mammalian capping enzyme complements mutant Saccharomyces cerevisiae lacking mRNA guanylyltransferase and selectively binds the elongating form of RNA polymerase II
Yue, Z; Maldonado, E; Pillutla, R; Cho, H; Reinberg, D; Shatkin, A J
1997 Nov 25;94(24):12898-12903, Proceedings of the National Academy of Sciences of the United States of America
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year: 1997,
vol: 94,
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Histone deacetylases and SAP18, a novel polypeptide, are components of a human Sin3 complex
Zhang, Y; Iratni, R; Erdjument-Bromage, H; Tempst, P; Reinberg, D
1997 May 2;89(3):357-364, Cell
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year: 1997,
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Human cyclin-dependent kinase-activating kinase exists in three distinct complexes
Drapkin, R; Le Roy, G; Cho, H; Akoulitchev, S; Reinberg, D
1996 Jun 25;93(13):6488-6493, Proceedings of the National Academy of Sciences of the United States of America
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year: 1996,
vol: 93,
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High-resolution mapping of nucleoprotein complexes by site-specific protein-DNA photocrosslinking: organization of the human TBP-TFIIA-TFIIB-DNA quaternary complex
Lagrange, T; Kim, T K; Orphanides, G; Ebright, Y W; Ebright, R H; Reinberg, D
1996 Oct 1;93(20):10620-10625, Proceedings of the National Academy of Sciences of the United States of America
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year: 1996,
vol: 93,
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Separation of the transcriptional coactivator and antirepression functions of transcription factor IIA
MA, D; Olave, I; Merino, A; Reinberg, D
1996 Jun 25;93(13):6583-6588, Proceedings of the National Academy of Sciences of the United States of America
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year: 1996,
vol: 93,
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Purification of human RNA polymerase II and general transcription factors
Maldonado, E; Drapkin, R; Reinberg, D
1996 ;274:72-100, Methods in enzymology
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vol: 274,
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A human RNA polymerase II complex associated with SRB and DNA-repair proteins
Maldonado, E; Shiekhattar, R; Sheldon, M; Cho, H; Drapkin, R; Rickert, P; Lees, E; Anderson, C W; Linn, S; Reinberg, D
1996 May 2;381(6577):86-89, Nature
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year: 1996,
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Requirement of a corepressor for Dr1-mediated repression of transcription
Mermelstein, F; Yeung, K; Cao, J; Inostroza, J A; Erdjument-Bromage, H; Eagelson, K; Landsman, D; Levitt, P; Tempst, P; Reinberg, D
1996 Apr 15;10(8):1033-1048, Genes & development
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year: 1996,
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The general transcription factors of RNA polymerase II
Orphanides, G; Lagrange, T; Reinberg, D
1996 Nov 1;10(21):2657-2683, Genes & development
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year: 1996,
vol: 10,
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Protein-protein interactions in eukaryotic transcription initiation: structure of the preinitiation complex
Tang, H; Sun, X; Reinberg, D; Ebright, R H
1996 Feb 6;93(3):1119-1124, Proceedings of the National Academy of Sciences of the United States of America
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year: 1996,
vol: 93,
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Requirement for TFIIH kinase activity in transcription by RNA polymerase II
Akoulitchev, S; Makela, T P; Weinberg, R A; Reinberg, D
1995 Oct 12;377(6549):557-560, Nature
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year: 1995,
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Solution structure of the C-terminal core domain of human TFIIB: similarity to cyclin A and interaction with TATA-binding protein
Bagby, S; Kim, S; Maldonado, E; Tong, K I; Reinberg, D; Ikura, M
1995 Sep 8;82(5):857-867, Cell
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year: 1995,
vol: 82,
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Visualization of TBP oligomers binding and bending the HIV-1 and adeno promoters
Griffith, J D; Makhov, A; Zawel, L; Reinberg, D
1995 Mar 10;246(5):576-584, Journal of molecular biology
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News on initiation and elongation of transcription by RNA polymerase II
Maldonado, E; Reinberg, D
1995 Jun;7(3):352-361, Current opinion in cell biology
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Transcriptional activation. Tuning-up transcription
Sheldon, M; Reinberg, D
1995 Jan 1;5(1):43-46, Current biology. CB
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Cdk-activating kinase complex is a component of human transcription factor TFIIH
Shiekhattar R; Mermelstein F; Fisher RP; Drapkin R; Dynlacht B; Wessling HC; Morgan DO; Reinberg D
1995 Mar 16;374(6519):283-287, Nature
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The 62- and 80-kDa subunits of transcription factor IIH mediate the interaction with Epstein-Barr virus nuclear protein 2
Tong, X; Drapkin, R; Reinberg, D; Kieff, E
1995 Apr 11;92(8):3259-3263, Proceedings of the National Academy of Sciences of the United States of America
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year: 1995,
vol: 92,
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Recycling of the general transcription factors during RNA polymerase II transcription
Zawel, L; Kumar, K P; Reinberg, D
1995 Jun 15;9(12):1479-1490, Genes & development
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year: 1995,
vol: 9,
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Common themes in assembly and function of eukaryotic transcription complexes
Zawel, L; Reinberg, D
1995 ;64:533-561, Annual review of biochemistry
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year: 1995,
vol: 64,
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Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II
Drapkin, R; Reardon, J T; Ansari, A; Huang, J C; Zawel, L; Ahn, K; Sancar, A; Reinberg, D
1994 Apr 21;368(6473):769-772, Nature
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vol: 368,
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The multifunctional TFIIH complex and transcriptional control
Drapkin, R; Reinberg, D
1994 Nov;19(11):504-508, Trends in biochemical sciences
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Transcription. The essential twist
Drapkin, R; Reinberg, D
1994 Jun 16;369(6481):523-524, Nature
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Where transcription meets repair
Drapkin, R; Sancar, A; Reinberg, D
1994 Apr 8;77(1):9-12, Cell
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year: 1994,
vol: 77,
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Interaction of the Dr1 inhibitory factor with the TATA binding protein is disrupted by adenovirus E1A
Kraus, V B; Inostroza, J A; Yeung, K; Reinberg, D; Nevins, J R
1994 Jul 5;91(14):6279-6282, Proceedings of the National Academy of Sciences of the United States of America
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year: 1994,
vol: 91,
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Reconstitution of human TFIIA activity from recombinant polypeptides: a role in TFIID-mediated transcription
Sun, X; Ma, D; Sheldon, M; Yeung, K; Reinberg, D
1994 Oct 1;8(19):2336-2348, Genes & development
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Differential regulation of RNA polymerases I, II, and III by the TBP-binding repressor Dr1
White, R J; Khoo, B C; Inostroza, J A; Reinberg, D; Jackson, S P
1994 Oct 21;266(5184):448-450, Science
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year: 1994,
vol: 266,
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Binding of basal transcription factor TFIIH to the acidic activation domains of VP16 and p53
Xiao, H; Pearson, A; Coulombe, B; Truant, R; Zhang, S; Regier, J L; Triezenberg, S J; Reinberg, D; Flores, O; Ingles, C J
1994 Oct;14(10):7013-7024, Molecular & cellular biology
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year: 1994,
vol: 14,
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Structure-function analysis of the TBP-binding protein Dr1 reveals a mechanism for repression of class II gene transcription
Yeung, K C; Inostroza, J A; Mermelstein, F H; Kannabiran, C; Reinberg, D
1994 Sep 1;8(17):2097-2109, Genes & development
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year: 1994,
vol: 8,
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Oct-2 facilitates functional preinitiation complex assembly and is continuously required at the promoter for multiple rounds of transcription
Arnosti, D N; Merino, A; Reinberg, D; Schaffner, W
1993 Jan;12(1):157-166, EMBO journal
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year: 1993,
vol: 12,
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Interaction of human thyroid hormone receptor beta with transcription factor TFIIB may mediate target gene derepression and activation by thyroid hormone
Baniahmad, A; Ha, I; Reinberg, D; Tsai, S; Tsai, M J; O'Malley, B W
1993 Oct 1;90(19):8832-8836, Proceedings of the National Academy of Sciences of the United States of America
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year: 1993,
vol: 90,
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Regulation of RNA polymerase II transcription
Drapkin, R; Merino, A; Reinberg, D
1993 Jun;5(3):469-476, Current opinion in cell biology
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year: 1993,
vol: 5,
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Multiple functional domains of human transcription factor IIB: distinct interactions with two general transcription factors and RNA polymerase II
Ha, I; Roberts, S; Maldonado, E; Sun, X; Kim, L U; Green, M; Reinberg, D
1993 Jun;7(6):1021-1032, Genes & development
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Isolation of a cDNA encoding the largest subunit of TFIIA reveals functions important for activated transcription
Ma, D; Watanabe, H; Mermelstein, F; Admon, A; Oguri, K; Sun, X; Wada, T; Imai, T; Shiroya, T; Reinberg, D
1993 Nov;7(11):2246-2257, Genes & development
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vol: 7,
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DNA topoisomerase I is involved in both repression and activation of transcription
Merino, A; Madden, K R; Lane, W S; Champoux, J J; Reinberg, D
1993 Sep 16;365(6443):227-232, Nature
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year: 1993,
vol: 365,
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Interaction between an acidic activator and transcription factor TFIIB is required for transcriptional activation
Roberts, S G; Ha, I; Maldonado, E; Reinberg, D; Green, M R
1993 Jun 24;363(6431):741-744, Nature
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year: 1993,
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The cycling of RNA polymerase II during transcription
Zawel, L; Lu, H; Cisek, L J; Corden, J L; Reinberg, D
1993 ;58:187-198, Cold Spring Harbor symposia on quantitative biology
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year: 1993,
vol: 58,
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Initiation of transcription by RNA polymerase II: a multi-step process
Zawel, L; Reinberg, D
1993 ;44:67-108, Progress in nucleic acid research & molecular biology
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year: 1993,
vol: 44,
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Factors involved in specific transcription by mammalian RNA polymerase II: purification and analysis of transcription factor IIA and identification of transcription factor IIJ
Cortes, P; Flores, O; Reinberg, D
1992 Jan;12(1):413-421, Molecular & cellular biology
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year: 1992,
vol: 12,
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Factors involved in specific transcription by mammalian RNA polymerase II. Identification and characterization of factor IIH
Flores, O; Lu, H; Reinberg, D
1992 Feb 5;267(4):2786-2793, Journal of biological chemistry
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Dr1, a TATA-binding protein-associated phosphoprotein and inhibitor of class II gene transcription
Inostroza, J A; Mermelstein, F H; Ha, I; Lane, W S; Reinberg, D
1992 Aug 7;70(3):477-489, Cell
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year: 1992,
vol: 70,
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Human general transcription factor IIH phosphorylates the C-terminal domain of RNA polymerase II
Lu, H; Zawel, L; Fisher, L; Egly, J M; Reinberg, D
1992 Aug 20;358(6388):641-645, Nature
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Protein kinases from Aspergillus nidulans that phosphorylate the carboxyl-terminal domain of the largest subunit of RNA polymerase II
Stone, N; Reinberg, D
1992 Mar 25;267(9):6353-6360, Journal of biological chemistry
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year: 1992,
vol: 267,
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Specific interaction between the nonphosphorylated form of RNA polymerase II and the TATA-binding protein
Usheva, A; Maldonado, E; Goldring, A; Lu, H; Houbavi, C; Reinberg, D; Aloni, Y
1992 May 29;69(5):871-881, Cell
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year: 1992,
vol: 69,
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Transcription by RNA polymerase II: initiator-directed formation of transcription-competent complexes
Weis, L; Reinberg, D
1992 Nov;6(14):3300-3309, FASEB journal
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year: 1992,
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Advances in RNA polymerase II transcription
Zawel, L; Reinberg, D
1992 Jun;4(3):488-495, Current opinion in cell biology
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year: 1992,
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Role of the mammalian transcription factors IIF, IIS, and IIX during elongation by RNA polymerase II
Bengal, E; Flores, O; Krauskopf, A; Reinberg, D; Aloni, Y
1991 Mar;11(3):1195-1206, Molecular & cellular biology
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The initiator directs the assembly of a transcription factor IID-dependent transcription complex
Carcamo, J; Buckbinder, L; Reinberg, D
1991 Sep 15;88(18):8052-8056, Proceedings of the National Academy of Sciences of the United States of America
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year: 1991,
vol: 88,
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The small subunit of transcription factor IIF recruits RNA polymerase II into the preinitiation complex
Flores, O; Lu, H; Killeen, M; Greenblatt, J; Burton, Z F; Reinberg, D
1991 Nov 15;88(22):9999-10003, Proceedings of the National Academy of Sciences of the United States of America
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year: 1991,
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Cloning of a human gene encoding the general transcription initiation factor IIB
Ha, I; Lane, W S; Reinberg, D
1991 Aug 22;352(6337):689-695, Nature
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year: 1991,
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Direct interaction between adenovirus E1A protein and the TATA box binding transcription factor IID
Horikoshi, N; Maguire, K; Kralli, A; Maldonado, E; Reinberg, D; Weinmann, R
1991 Jun 15;88(12):5124-5128, Proceedings of the National Academy of Sciences of the United States of America
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vol: 88,
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Factors involved in specific transcription by mammalian RNA polymerase II. Purification and functional analysis of general transcription factor IIE
Inostroza, J; Flores, O; Reinberg, D
1991 May 15;266(14):9304-9308, Journal of biological chemistry
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Binding of general transcription factor TFIIB to an acidic activating region
Lin, Y S; Ha, I; Maldonado, E; Reinberg, D; Green, M R
1991 Oct 10;353(6344):569-571, Nature
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The nonphosphorylated form of RNA polymerase II preferentially associates with the preinitiation complex
Lu, H; Flores, O; Weinmann, R; Reinberg, D
1991 Nov 15;88(22):10004-10008, Proceedings of the National Academy of Sciences of the United States of America
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Structure and functional properties of human general transcription factor IIE
Peterson, M G; Inostroza, J; Maxon, M E; Flores, O; Admon, A; Reinberg, D; Tjian, R
1991 Dec 5;354(6352):369-373, Nature
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Interaction of CAP sequence site binding factor and transcription factor IID preceding and following binding to the adenovirus 2 major late promoter
Safer, B; Reinberg, D; Jacob, W F; Maldonado, E; Carcamo, J; Garfinkel, S; Cohen, R
1991 Jun 15;266(17):10989-10994, Journal of biological chemistry
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A TATA-like sequence located downstream of the transcription initiation site is required for expression of an RNA polymerase II transcribed gene
Carcamo, J; Maldonado, E; Cortes, P; Ahn, M H; Ha, I; Kasai, Y; Flint, J; Reinberg, D
1990 Sep;4(9):1611-1622, Genes & development
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Factors involved in specific transcription by mammalian RNA polymerase II. Purification and subunit composition of transcription factor IIF
Flores, O; Ha, I; Reinberg, D
1990 Apr 5;265(10):5629-5634, Journal of biological chemistry
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Factors involved in specific transcription by mammalian RNA polymerase II: role of transcription factors IIA, IID, and IIB during formation of a transcription-competent complex
Maldonado, E; Ha, I; Cortes, P; Weis, L; Reinberg, D
1990 Dec;10(12):6335-6347, Molecular & cellular biology
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TPA can overcome the requirement for EIa and together act synergistically in stimulating expression of the adenovirus EIII promoter
Buckbinder, L; Miralles, V J; Reinberg, D
1989 Dec 20;8(13):4239-4250, EMBO journal
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Factors involved in specific transcription by mammalian RNA polymerase II. Role of factors IID and MLTF in transcription from the adenovirus major late and IVa2 promoters
Carcamo, J; Lobos, S; Merino, A; Buckbinder, L; Weinmann, R; Natarajan, V; Reinberg, D
1989 May 5;264(13):7704-7714, Journal of biological chemistry
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Factors involved in specific transcription by mammalian RNA polymerase II. Factors IIE and IIF independently interact with RNA polymerase II
Flores, O; Maldonado, E; Reinberg, D
1989 May 25;264(15):8913-8921, Journal of biological chemistry
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Phosphorylation of cellular proteins regulates their binding to the cAMP response element
Merino, A; Buckbinder, L; Mermelstein, F H; Reinberg, D
1989 Dec 15;264(35):21266-21276, Journal of biological chemistry
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Initiation of transcription by RNA polymerase II
Mermelstein, F H; Flores, O; Reinberg, D
1989 Sep 21;1009(1):1-10, Biochimica & biophysica acta
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year: 1989,
vol: 1009,
page: 1,
stat: Journal Article,
The adenovirus inverted terminal repeat functions as an enhancer in a cell-free system
Miralles, V J; Cortes, P; Stone, N; Reinberg, D
1989 Jun 25;264(18):10763-10772, Journal of biological chemistry
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year: 1989,
vol: 264,
page: 10763,
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EivF, a factor required for transcription of the adenovirus EIV promoter, binds to an element involved in EIa-dependent activation and cAMP induction
Cortes, P; Buckbinder, L; Leza, M A; Rak, N; Hearing, P; Merino, A; Reinberg, D
1988 Aug;2(8):975-990, Genes & development
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year: 1988,
vol: 2,
page: 975,
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Factors involved in specific transcription by mammalian RNA polymerase II. RNA polymerase II-associating protein 30 is an essential component of transcription factor IIF
Flores, O; Maldonado, E; Burton, Z; Greenblatt, J; Reinberg, D
1988 Aug 5;263(22):10812-10816, Journal of biological chemistry
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id: 70000,
year: 1988,
vol: 263,
page: 10812,
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Purification and functional characterization of transcription factor SII from calf thymus. Role in RNA polymerase II elongation
Rappaport, J; Reinberg, D; Zandomeni, R; Weinmann, R
1987 Apr 15;262(11):5227-5232, Journal of biological chemistry
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id: 70002,
year: 1987,
vol: 262,
page: 5227,
stat: Journal Article,
Factors involved in specific transcription in mammalian RNA polymerase II. Functional analysis of initiation factors IIA and IID and identification of a new factor operating at sequences downstream of the initiation site
Reinberg, D; Horikoshi, M; Roeder, R G
1987 Mar 5;262(7):3322-3330, Journal of biological chemistry
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id: 70004,
year: 1987,
vol: 262,
page: 3322,
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Factors involved in specific transcription by mammalian RNA polymerase II. Purification and functional analysis of initiation factors IIB and IIE
Reinberg, D; Roeder, R G
1987 Mar 5;262(7):3310-3321, Journal of biological chemistry
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id: 70005,
year: 1987,
vol: 262,
page: 3310,
stat: Journal Article,
Factors involved in specific transcription by mammalian RNA polymerase II. Transcription factor IIS stimulates elongation of RNA chains
Reinberg, D; Roeder, R G
1987 Mar 5;262(7):3331-3337, Journal of biological chemistry
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id: 70003,
year: 1987,
vol: 262,
page: 3331,
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The enzymatic conversion of 3'-phosphate terminated RNA chains to 2',3'-cyclic phosphate derivatives
Reinberg, D; Arenas, J; Hurwitz, J
1985 May 25;260(10):6088-6097, Journal of biological chemistry
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id: 70006,
year: 1985,
vol: 260,
page: 6088,
stat: Journal Article,
Analysis of bacteriophage phi X174 gene A protein-mediated termination and reinitiation of phi X DNA synthesis. I. Characterization of the termination and reinitiation reactions
Brown, D R; Roth, M J; Reinberg, D; Hurwitz, J
1984 Aug 25;259(16):10545-10555, Journal of biological chemistry
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id: 70007,
year: 1984,
vol: 259,
page: 10545,
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DNA structures required for phi X174 A-protein-directed initiation and termination of DNA replication
Brown, D R; Reinberg, D; Schmidt-Glenewinkel, T; Roth, M; Zipursky, S L; Hurwitz, J
1983 ;47 Pt 2:701-715, Cold Spring Harbor symposia on quantitative biology
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year: 1983,
vol: 47 Pt 2,
page: 701,
stat: Journal Article,
Analysis of the phiX174 gene A protein using in vitro DNA replication systems
Brown, D R; Reinberg, D; Schmidt-Glenewinkel, T; Zipursky, S L; Hurwitz, J
1983 ;100:217-239, Methods in enzymology
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id: 70010,
year: 1983,
vol: 100,
page: 217,
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DNA sequences which support activities of the bacteriophage phi X174 gene A protein
Brown, D R; Schmidt-Glenewinkel, T; Reinberg, D; Hurwitz, J
1983 Jul 10;258(13):8402-8412, Journal of biological chemistry
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id: 70008,
year: 1983,
vol: 258,
page: 8402,
stat: Journal Article,
Studies on the phi X174 gene A protein-mediated termination of leading strand DNA synthesis
Reinberg, D; Zipursky, S L; Weisbeek, P; Brown, D; Hurwitz, J
1983 Jan 10;258(1):529-537, Journal of biological chemistry
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id: 70009,
year: 1983,
vol: 258,
page: 529,
stat: Journal Article,
Separate requirements for leading and lagging strand DNA synthesis during phi X A protein-dependent RF goes to RF DNA replication in vitro
Reinberg, D; Zipursky, S L; Hurwitz, J
1981 Dec 25;256(24):13143-13151, Journal of biological chemistry
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id: 70012,
year: 1981,
vol: 256,
page: 13143,
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Initiation of DNA replication by the dnaG protein
Benz, E W Jr; Reinberg, D; Vicuna, R; Hurwitz, J
1980 Feb 10;255(3):1096-1106, Journal of biological chemistry
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id: 70014,
year: 1980,
vol: 255,
page: 1096,
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In vitro DNA replication of recombinant plasmid DNAs containing the origin of progeny replicative form DNA synthesis of phage phi X174
Zipursky, S L; Reinberg, D; Hurwitz, J
1980 Sep;77(9):5182-5186, Proceedings of the National Academy of Sciences of the United States of America
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id: 70013,
year: 1980,
vol: 77,
page: 5182,